| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1626 |
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| Symbol | |
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| ID | 4018101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1890635 |
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| End bp | 1891750 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955636 |
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| Product | ribonuclease D |
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| Protein accession | YP_562633 |
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| Protein GI | 91792982 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000103666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAGCTT TCGAATATAT CAGTGATGAT GCCAGCCTTC GGGCACTTGT TGAGCAGTAT
CAATCCAGCC CTCTATTAGT GTTAGATACA GAATTTGTGC GTACTCGTAC CTATTACGCT
AGGCTAGGCT TGATCCAAGC CTTCGATGGC AAGACCTTAG CCTTAATCGA TCCGGTGGCT
ATTGAAGATT TATCGCCGTT CTGGCAATTG TTAACCGCAC CTCATATCAC TAAGTTAGTG
CATTCTTGCA GCGAAGATTT AGAAGTCTTT GCTCATTACG GTCATTGCCA ACCCGCGCCG
CTGTTTGACA GTCAAATCGC CGCAAGTTTA GCGGGATTAG GTCATGGGTT AGGTTATGCT
AAGTTGGTGC AAGAGTGCTT AAGTGTCGAG ATAGACAAAG GCGAGTCACG TACCGATTGG
ATGAAGCGTC CACTGACTGA TGCGCAGCTG CAATATGCCG CTAATGACGT ATTCTATTTA
TATAAACTCT ATCCTTTATT GCTTGAAAAG CTTAACGCCA ATGGCAGAGT CGAGTGGCTG
CTTGAAGAAG GCCAGCGTAT GACACAAGAC AGATTATCTC TGCCAGATGG TGAAAGCGCT
TATATCAAGG TGAAGAATGC CTTCCAGTTG TTGCCAGAAC AATTAGCTTA CTTGAAAGTA
CTTGGGAAAT GGCGGTTAGA GAAAGCCTTA GCGAAAGATT TAGCCTTAGG CTTTGTGGTG
AAAGACCATG CGTTAATTGC CTTAGCCAAG AAGCAGCCCA GTAGTGTTGC TGAGCTTAAT
CGCATGACAG AGCTGACCGA GCAAGAAAAA CGTATTCACG GCCGCGATCT TATTCGTGTT
TTGACGACGG CAGATCTTGA TAATTTACCT GAACAGCTCG ATGTCATCGC ATTGAAACCT
GGCTATAAGT CGACCTTTAA AGAGATTAAA AACACCATTA CCAGCTTGTG TGAACAGGCG
GATATCCCAG TGGAGTTTTT AGGCTCTAAG CGCCTAATTC ATGAGCTTTT GCTGTGGTTG
TGGCATGGTA AAACGACATC AATGCCATTA TTGCTGACAG GTTGGCGCGG GGCTATCGTG
GCTGATGCGC TAGCAGAGGT TAGTTTCTCG CAATAA
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| Protein sequence | MLAFEYISDD ASLRALVEQY QSSPLLVLDT EFVRTRTYYA RLGLIQAFDG KTLALIDPVA
IEDLSPFWQL LTAPHITKLV HSCSEDLEVF AHYGHCQPAP LFDSQIAASL AGLGHGLGYA
KLVQECLSVE IDKGESRTDW MKRPLTDAQL QYAANDVFYL YKLYPLLLEK LNANGRVEWL
LEEGQRMTQD RLSLPDGESA YIKVKNAFQL LPEQLAYLKV LGKWRLEKAL AKDLALGFVV
KDHALIALAK KQPSSVAELN RMTELTEQEK RIHGRDLIRV LTTADLDNLP EQLDVIALKP
GYKSTFKEIK NTITSLCEQA DIPVEFLGSK RLIHELLLWL WHGKTTSMPL LLTGWRGAIV
ADALAEVSFS Q
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