| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1564 |
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| Symbol | lpxD |
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| ID | 4018038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1818680 |
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| End bp | 1819702 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955574 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_562572 |
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| Protein GI | 91792921 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000128344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATGA CTTTAAAAGA ACTTGGTGAA ATGCTTGGCG CCCGTGTGCA AGGTAATGAG
CTGCTGACAA TCAGCAGTGT TGGTACCTTA GAATCGGCCC AAACTGACCA ACTTTCTTTT
TTAGCCAATA GTAAATACCG TTCCCAGCTT GAGTCTACTC AGGCTGGGGC AGTATTACTG
AGCGAGAAAG AAGCCAATAA TTTTCAAGGC AATGCGCTTA TCGTCAAAGA CCCTTATGTG
GCCTTTGCTC GCGTTGCTCA GCGATTAGAT ACCACCCCAA AAGCGGCCGT AGGCATTCAT
CCCTCGGCGC AAATTGATGC CTCGGCTCAG ATTGGTCAAG GGGCAGCCAT AGGCGCCAAT
GCCGTTATCG GCGCAGGTGT TATTATTGGC GAACACTGCC AAATTGGCCC AGGTTGCGTC
ATAGGCGAGC ACAGCATTTT AGGCTCAAAT ACACGGCTGT GGGCTAATGT GACGCTTTAT
CATGATGTCC ATTTAGGACA AAACTGCATT ATTCATTCTG GTGCTGTTCT AGGCTCCGAC
GGTTTCGGTT ATGCCAATGA GCGCGGCACT TGGGTTAAAA TCCCGCAAAC AGGTGGCGTT
CGTATTGGTG ATAATGTTGA AATCGGCGCC AATACTGCGG TAGATCGCGG TGCATTGGGC
CACACAGAAA TTGGTGACGG GGTTATTTTA GATAACCAAG TTCAAATTGC CCATAATGCC
ATTATTGGTA AGCATACCGC CATAGCTGGC GGCAGTATTA TTGCGGGCAG CACTAAGCTT
GGGCAGTATT GTATCGTCGG TGGCAACAGT GCCATCGCAG GTCACCTTAA GATTGCCGAT
GGGGTGCACG TGAGTGGCGG CACTAACGTC ACCAGTGAAA TTCGCGAACC TGGTACTTAT
TCGTCGGCCA CAGTGGCCGT CGAAAACAAG CTCTGGCGCC GTAATACGGT GAGATTCCGT
CAACTCGATG ACTTGTTCAA TCGAGTGAAA TTGCTTGAAA AACAGCAGAA AACTCAAGAT
TAA
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| Protein sequence | MKMTLKELGE MLGARVQGNE LLTISSVGTL ESAQTDQLSF LANSKYRSQL ESTQAGAVLL
SEKEANNFQG NALIVKDPYV AFARVAQRLD TTPKAAVGIH PSAQIDASAQ IGQGAAIGAN
AVIGAGVIIG EHCQIGPGCV IGEHSILGSN TRLWANVTLY HDVHLGQNCI IHSGAVLGSD
GFGYANERGT WVKIPQTGGV RIGDNVEIGA NTAVDRGALG HTEIGDGVIL DNQVQIAHNA
IIGKHTAIAG GSIIAGSTKL GQYCIVGGNS AIAGHLKIAD GVHVSGGTNV TSEIREPGTY
SSATVAVENK LWRRNTVRFR QLDDLFNRVK LLEKQQKTQD
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