| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1561 |
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| Symbol | |
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| ID | 4018035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1814225 |
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| End bp | 1815595 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955571 |
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| Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
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| Protein accession | YP_562569 |
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| Protein GI | 91792918 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000461405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGATT TTCTGTGGAA CCTAGGCTCG TTCATTGTTG CCCTTGGCAT TCTGATCACG
GCCCATGAAT ATGGTCACTT TTGGGTAGCC CGCCGCTGCG GTGTTAAAGT CGAACGCTTT
TCAATTGGTT TTGGTAAGGC ACTTTGGCGC AAAGTCGGCC AAGATGGCAC TGAATATGTG
ATAGCTATGA TCCCGCTGGG CGGTTATGTA AAGATGCTCG ATGAGCGGGT TGACACAGTA
GCTGAATCAC TTAAGTCTCA AGCCTTTAAT CGTAAAACCG TTTGGCAACG CATTGCCATA
GTTGCTGCGG GGCCTATCGC TAATTTTCTT TTTGCTATCA TAGCTTTATA TTTTATGTAT
CTTATTGGTG TTCCTTCGGT TAAGCCCGTG ATCGATACGA CCTTAGCCAA TACACCTGCC
GCGCAAATTA AGTTGAGTGA ATATCAAGAA ATTATCACCA TTTCAGGTCA GAAAGTGCGC
AATTGGGATG AGGTTAACTT AGCCCTGATT GGCCATATAG GCGAAGATGA AATTGATATT
GAACTTGCGC CCTTATCCAG ACTCGAAGGA ATGGACACTG GTTCGAGACA TCATCAGCTA
GACATTCGAC ATTGGCAATT TGATCCAGAA AAGCAATCGC CAATAACCTC TTTAGGGTTA
GGCATATTCA GACCCCAAGT GTTGCCTGAA CTTGCCGTAG TGGCAAAAGG CAGTGCAGCT
GAACGAGGCG GAATATTACC AGGTGATACC TTAATGGCAA TCAATGGTAG TGCCTTTGAT
AGCTGGGAAA GCTTTGTGAC ATTAATTCAG GGCTCAACTG GGAAGGCGGT GCTGCTAACA
GTTAAACGCG GAATGCAGAC CTTAGATGTG GATTTGGTGC CAGACACTCA AATCGACAAA
CAAGGTCGCA GTATTGGTGT CTTGGGCGTG AGTCCGACGC AAGCTAAATG GCCAGAAAAT
ATGCGTATTT CTTTGGAATA TGGCATAGTA GACTCGATTT TTGCCGCAGT AGACAAAACG
TGGCAATTGA TCGTCGTCAG TTTCAAGATG ATAGCTAAAC TTTTTACCGG TGATGTGTCG
GTGAAAAACT TAAGCGGACC TATATCCATA GCGCAAGGTG CTGGTGCTAG TGCTGATTAT
GGATTAGTGT ACTTTCTTGG GTTTATTGCA CTCATTAGCG TCAACTTAGG CATAATTAAT
CTTTTGCCTT TGCCTGTGCT CGATGGGGGA CATTTGCTGT ATTACTTTAT TGAAGTGATT
ACGGGTAGGC CTGTGCCTGA AAAAGCACAG GAAATAGGAT TCAGAATTGG AGCAGCTATG
CTGCTGATGT TGATGAGTAT TGCACTCTTC AATGATTTTG CCCGACTCTG A
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| Protein sequence | MFDFLWNLGS FIVALGILIT AHEYGHFWVA RRCGVKVERF SIGFGKALWR KVGQDGTEYV
IAMIPLGGYV KMLDERVDTV AESLKSQAFN RKTVWQRIAI VAAGPIANFL FAIIALYFMY
LIGVPSVKPV IDTTLANTPA AQIKLSEYQE IITISGQKVR NWDEVNLALI GHIGEDEIDI
ELAPLSRLEG MDTGSRHHQL DIRHWQFDPE KQSPITSLGL GIFRPQVLPE LAVVAKGSAA
ERGGILPGDT LMAINGSAFD SWESFVTLIQ GSTGKAVLLT VKRGMQTLDV DLVPDTQIDK
QGRSIGVLGV SPTQAKWPEN MRISLEYGIV DSIFAAVDKT WQLIVVSFKM IAKLFTGDVS
VKNLSGPISI AQGAGASADY GLVYFLGFIA LISVNLGIIN LLPLPVLDGG HLLYYFIEVI
TGRPVPEKAQ EIGFRIGAAM LLMLMSIALF NDFARL
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