Gene Sden_1557 details

Gene Information

• Locus tag: Sden_1557
• Symbol: frr
• ID: 4018031
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1810605
• End bp: 1811162
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637955567
• Product: ribosome recycling factor
• Protein accession: YP_562565
• Protein GI: 91792914
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0233] Ribosome recycling factor
• TIGRFAM ID: [TIGR00496] ribosome recycling factor

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000000135969
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAGAAA CAATTTTGTT AGATGCCCAA GAGCGTATGG GCAAATGTGT TGATGCAACT 
AAAAACCAAA TGGCGAAAGT ACGCACAGGT CGTGCTCACC CAAGCCTATT AGATTCGATT 
CAAGTGTCAT ATTACGGTGC TATGTCGCCG CTTAAGCAAG TGGCTAACGT AGGTATCGAA 
GACTCGCGTA CCTTGTCAGT GACTGTGTTT GATCGCTCTA TGGTTCAGGC CGTAGAAAAA 
GCCATCATGA CGTCAGATCT AGGTTTAAAC CCTATGACGG CTGGCGCGAC ACTGCGTATT 
CCGTTACCTG CATTGACTGA AGAACGTCGT AAAGACTTCA TCAAGGTAGT ACGTAATGAA 
GCCGAAAATG GTCGTATCGC TATTCGTAAT GTGCGCCGCG ACGCTATCAG TGAAGTGAAA 
AAGCTTGAAA AAGCCAAAGA GTGCACTGAA GATGATGTAC GCCGCAGCGA AGATGAAGTG 
CAAAAGTATA CTGATGCACA CATCAAAAAT GTCGATGAAG TTTTAACCGC AAAAGAAAAA 
GAGTTAATGG AAGTTTAA 

 

Protein sequence

MIETILLDAQ ERMGKCVDAT KNQMAKVRTG RAHPSLLDSI QVSYYGAMSP LKQVANVGIE 
DSRTLSVTVF DRSMVQAVEK AIMTSDLGLN PMTAGATLRI PLPALTEERR KDFIKVVRNE 
AENGRIAIRN VRRDAISEVK KLEKAKECTE DDVRRSEDEV QKYTDAHIKN VDEVLTAKEK 
ELMEV