| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1554 |
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| Symbol | rpsB |
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| ID | 4018028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1808003 |
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| End bp | 1808731 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955564 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_562562 |
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| Protein GI | 91792911 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000541684 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTACTG TTACAATGCG CGACATGCTA CAAGCCGGTG TTCACTTCGG TCACCAAACA
CGTTACTGGA ACCCAAAGAT GAAGCCATTC ATCTTCGGTG CTCGCAACGG TGTACACATC
ATCAACCTTG AGCACACTGT GCCTATGTTC AACGAAGCGT TAGCTTTCAT CAGCAACGTA
GCGTCTAAAA AAGGCAAAGT GTTATTCGTT GGTACTAAAC GTGCCGCTGG CGAAGCAATC
AAAGAGTCAG CTCTTTCTTG TGACCAGTAC TATGTTGATC ACCGTTGGTT AGGTGGTATG
TTGACTAACT GGAAAACAGT TCGTCAATCA ATCAAGCGTC TTAAAGAGCT AGAAAGCCAG
TCAGTAGACG GTACTTTCGA CAAGCTAACT AAGAAAGAAG CCTTGATGCG TACTCGCGAA
CTAGAGAAGT TAGAAAAATC TTTAGGCGGG ATCAAGAACA TGGGCGGTTT ACCTGACGTA
TTATTCGTTA TCGGTGCTGA CCATGAGCAT ATCGCTATTA AAGAAGCTAA CAACCTAGGT
ATCCCAGTTG TTGCTGTTGT TGATACAAAC TCTGCGCCAG ATGGTGTTAA CTACATCGTT
CCTGGTAACG ACGACGCTAT GCGTGCTATC CGTTTGTACA CTTCTTCTGT TGCAGCAGCT
GCGAACTCTG GCCGTGGTCA AGATCTAGCT GTTCAAGCAG AGCAAGACGG TTTCGTAGAA
GCTGTTTAA
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| Protein sequence | MTTVTMRDML QAGVHFGHQT RYWNPKMKPF IFGARNGVHI INLEHTVPMF NEALAFISNV
ASKKGKVLFV GTKRAAGEAI KESALSCDQY YVDHRWLGGM LTNWKTVRQS IKRLKELESQ
SVDGTFDKLT KKEALMRTRE LEKLEKSLGG IKNMGGLPDV LFVIGADHEH IAIKEANNLG
IPVVAVVDTN SAPDGVNYIV PGNDDAMRAI RLYTSSVAAA ANSGRGQDLA VQAEQDGFVE
AV
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