| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1499 |
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| Symbol | |
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| ID | 4017268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1738475 |
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| End bp | 1739062 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955509 |
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| Product | periplasmic nitrate reductase c-type cytochrome, NapC/NirT |
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| Protein accession | YP_562507 |
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| Protein GI | 91792856 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.924736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGATA AACTGAAACA AATCTGGAAG ATAGTGAATC GTCCCAGTGT GCATTACAGT
TTAGGCTTCT TGACCTTAGG GGGCTTCTTA GCGGGGATCA TCTTTTGGGG GGGGTTTAAC
ACCGCCCTTG AAGTCACCAA TACCGAGAAG TTCTGCATTG GTTGTCATGA GATGGAAAAC
AATGTCTATC AGGAGCTACA AACCACCATC CACTTTACTA ACCGAAGTGG GGTGCGCGCA
ACCTGTCCTG ATTGTCATGT GCCCCATAAC TGGACTGATA AAATTGCCCG TAAAATGCAG
GCCTCCAAAG AAGTCTGGGG TAAGATTTTT GGGACTATCA GTACTCGTGA AAAATTTGAG
GCCAAACGTC GCCACCTTGC TGAAAATGAA TGGGTACGTT TAAAGGCTAA TGATTCCTTG
GAATGTCGAA ATTGTCATAA TTTCGATTAC ATGGATTTCA CCCGTCAGTC GACCCGTGCA
GCTCAGATGC ACTCAACCTC TTTGGCAAGC GGCGAGAAAA CCTGTATCGA TTGCCACAAA
GGCATAGCCC ATCAACTGCC AGATATGCAT GGGGTAGAAG GCTTCTAG
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| Protein sequence | MLDKLKQIWK IVNRPSVHYS LGFLTLGGFL AGIIFWGGFN TALEVTNTEK FCIGCHEMEN
NVYQELQTTI HFTNRSGVRA TCPDCHVPHN WTDKIARKMQ ASKEVWGKIF GTISTREKFE
AKRRHLAENE WVRLKANDSL ECRNCHNFDY MDFTRQSTRA AQMHSTSLAS GEKTCIDCHK
GIAHQLPDMH GVEGF
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