| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1494 |
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| Symbol | |
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| ID | 4017263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1733519 |
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| End bp | 1734286 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955504 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_562502 |
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| Protein GI | 91792851 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000180405 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAATGC TTAAAGATAA AGTGGCTATC GTCACAGGTG CGAGTTCCGG AATAGGCTAT
GAGACGGCAA AATTATTCGC ATTAGAGGGA GCTAAGGTGG TTGTCGGCGC TCGACGCAGT
GAAAAGCTTT TGCAACTAGT CAGTGAAATT ACTGAATTAG GCGGGAAGGC AATTGCCCTC
CCTGGAGATG TGAAAGACGA ATCTTACGCC AAAGCATTGG TTGAACTTGC CAGTGAGCGA
TTCGGCGGTT TGGATATTGC TTTTAACAAT GCAGCCACTA ATGGCGCCTT AGGAATTGAT
TCAACGGAAC TTTCCTTAGA AGAGTGGAAT AATACCCTAA CCACCAACCT CACAAGTTCA
TTTCTCGGAG CAAAATATCA ATTAGAGCAC ATGCTTAAAC GAGGAAAAGG CGCTATTATT
TTCACCTCTT CCTTCGTAGG TTACACTATC GGGTTTCCAC AAAATGCAGC ATATGCCGCA
AGTAAAGCTG GATTGGTCGG ACTCACTAAG GCTTTGGCCG TAGAGTATGG ATCCCGTAAT
ATTAGAATTA ATGCCTTACT GCCTGGAGGT ACTGATACCC AGATGGGACG GGAATTTGCA
AGTACCCCCG AGTCTCTTGA ATTTGTTAAA AGTATTCATG CATTAAAGCG GTTAGCTGCA
CCCACAGAGA TAGCACAATC GGCTCTCTAC CTCGCTTCTG ATGCAGCGAG TTTTACAACT
GGAACCGCCC TATTAGTTGA TGGTGGCGTC TCGATTTGCA AAACATAG
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| Protein sequence | MAMLKDKVAI VTGASSGIGY ETAKLFALEG AKVVVGARRS EKLLQLVSEI TELGGKAIAL
PGDVKDESYA KALVELASER FGGLDIAFNN AATNGALGID STELSLEEWN NTLTTNLTSS
FLGAKYQLEH MLKRGKGAII FTSSFVGYTI GFPQNAAYAA SKAGLVGLTK ALAVEYGSRN
IRINALLPGG TDTQMGREFA STPESLEFVK SIHALKRLAA PTEIAQSALY LASDAASFTT
GTALLVDGGV SICKT
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