Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1492 |
Symbol | |
ID | 4017261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1730630 |
End bp | 1732516 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637955502 |
Product | hypothetical protein |
Protein accession | YP_562500 |
Protein GI | 91792849 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000165722 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAGCC CGCGTCTTTT AAGTTTAGCC ATACTCATCG CCCTTGGTGG TTGTTCACCT GATCCTATCG TAGAAACACA GCCTGTTGAA ATTTCACTTT CCCAAGCCTC GCCTCAAGTG AACCTTGCTA GTGCTGAGCA ACAACTTGAG GCTGCGGTAG CAAACTTTGC CAGCGATTTT ATTCAATTGC AGCCAGCCAT GGCGACGTCA TTGAATTTAT CTCAAGGGCA AGCGGGAGAT TTTCAGCGCC GCCTACCGGA TTATTCCTCC CAAGGGGTAC AGGCCTTTAA GCTGCAAATG CAACAAGCTG CCCATGCCTT GGCCAGCATT GAAGCCCGCG GTCTTAGTGA TGAGCAGCAG CGGCATAGAT TGATCAATCA AGTTATCGGC CAATATTACG CGGGCCTTGC AGATTTCAAC GCCGGCTATA TTGACACTTG GGCAGGGCAC TTACCGTATA TTGTCAATCA AATAAATGGC CCCTTGATTG ATATTCCTGC CATTTTAGCC GATCAACAAA CCATTAATAG CCTAGTGGAT GGCCAAGATT ATCTGGCGCG TCTTTCTGCG CTGGCCCTCA TGGTGGGGCA AGTGCAATCC AAAGTGGCCG AAGATGCTAA AGAAGGGGTG ATTCTTCCTA AGGCATTATT CCCTAATACA TTGAAGTATC TGGCAAACTT TGTCGCCTCT CCAGCCGCAG AGCATAGCTT AGTGACAAGC TTTGCGACTA AACTCAGTAA CGTGCCTGAA CTGACGCCAG AACAAGTACA GGCCTTAACA GATAAAGCCA TTGCACAAGT AGAAACCAAC ATTTACCCAG CTTATCGCTC ATTAACGGCA TTTATGTTGG CGCTGGAAGC TAAGGCGCCT ACCGAGGTGG GCATTTGGGC TCAGCCGAAC GGAAAAGCCT TTTATCAGCA TGGGATAACC TATCTTGCCG ATTCAAGCCT CGGCGCCGAT GCCATCCATC AACTGGGTAT TGATGAGGTG ACGCGTATAA CCAAGGAAAT GGACGCTATT TTAAGCGCCA ATGGGTACAC TGAAGGCAGT GTTGGTGAGC GCATGCTAGT GCTTAATCAA GAGCCTCGTT TCTTGTATGA AAATTCAGAC GCGGGCCGTC AACAATTACT TAATGATTTA AGCGCTGAAA TTAAGCGGGT AATGGACAAG GCGCCTTCGC TGTTTTCAAG CTTACCGCCT CAAGAAGTGG TGGTGAAACG CGTGCCCGTT GAAACCCAAG CCGGCGCAGC CGGTGGCTCT TATGTACCTC CTGCACTGGA TGGTAGCAGA GCAGGGGTTT ACTTTATAAA CTTAATGGAC ATGACCTCTA TTGTGAAATA CGGTCTAAAA ACCTTAACTT ACCATGAGGC TGTGCCCGGA CATCATTTTC AAATTGCGCT GAATATGCAA CAAACCGACA TAGGCTTGAT GCGCCAGAAT GCCTCTTTCA ATGCTTTCAT CGAGGGCTGG GCGTTATACG CCGAACAAGT GGCGTTCGAA ATGGGCATGT ATGAAAACGA TCCTTGGGGC AACTTAGGTC GCCTACAAGC CGAAGTCTAC CGCGCCGCTA GGTTAGTGGT GGACAGCGGA CTGCATCATA AAAAGTGGAG CCGTGCAGAG GCGATTAGCT ACTTTGCGAC CGCGACAGGC TCAACAGAAG CCAATGTGGC GTCAGCCATC GACAGGTATA TTGCCTGGCC GGGTCAAGCC TTAGGTTATA AGCTGGGTAT GTTAAAGATT GTCGAGCTGC GCGAGCTTGC CAAAACGGCC TTAGGCGATA AGTTTGATAT CAGGCAATTT CACGATTTGA TTTTATTGCC AGGGGCACGC CCTATGAGCG TGGTAGAAGC CGATGTTAAC AACTGGATTG CTAAGAAAAA ATCATAA
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Protein sequence | MFSPRLLSLA ILIALGGCSP DPIVETQPVE ISLSQASPQV NLASAEQQLE AAVANFASDF IQLQPAMATS LNLSQGQAGD FQRRLPDYSS QGVQAFKLQM QQAAHALASI EARGLSDEQQ RHRLINQVIG QYYAGLADFN AGYIDTWAGH LPYIVNQING PLIDIPAILA DQQTINSLVD GQDYLARLSA LALMVGQVQS KVAEDAKEGV ILPKALFPNT LKYLANFVAS PAAEHSLVTS FATKLSNVPE LTPEQVQALT DKAIAQVETN IYPAYRSLTA FMLALEAKAP TEVGIWAQPN GKAFYQHGIT YLADSSLGAD AIHQLGIDEV TRITKEMDAI LSANGYTEGS VGERMLVLNQ EPRFLYENSD AGRQQLLNDL SAEIKRVMDK APSLFSSLPP QEVVVKRVPV ETQAGAAGGS YVPPALDGSR AGVYFINLMD MTSIVKYGLK TLTYHEAVPG HHFQIALNMQ QTDIGLMRQN ASFNAFIEGW ALYAEQVAFE MGMYENDPWG NLGRLQAEVY RAARLVVDSG LHHKKWSRAE AISYFATATG STEANVASAI DRYIAWPGQA LGYKLGMLKI VELRELAKTA LGDKFDIRQF HDLILLPGAR PMSVVEADVN NWIAKKKS
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