Gene Sden_1492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1492 
Symbol 
ID4017261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1730630 
End bp1732516 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content49% 
IMG OID637955502 
Producthypothetical protein 
Protein accessionYP_562500 
Protein GI91792849 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000165722 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAGCC CGCGTCTTTT AAGTTTAGCC ATACTCATCG CCCTTGGTGG TTGTTCACCT 
GATCCTATCG TAGAAACACA GCCTGTTGAA ATTTCACTTT CCCAAGCCTC GCCTCAAGTG
AACCTTGCTA GTGCTGAGCA ACAACTTGAG GCTGCGGTAG CAAACTTTGC CAGCGATTTT
ATTCAATTGC AGCCAGCCAT GGCGACGTCA TTGAATTTAT CTCAAGGGCA AGCGGGAGAT
TTTCAGCGCC GCCTACCGGA TTATTCCTCC CAAGGGGTAC AGGCCTTTAA GCTGCAAATG
CAACAAGCTG CCCATGCCTT GGCCAGCATT GAAGCCCGCG GTCTTAGTGA TGAGCAGCAG
CGGCATAGAT TGATCAATCA AGTTATCGGC CAATATTACG CGGGCCTTGC AGATTTCAAC
GCCGGCTATA TTGACACTTG GGCAGGGCAC TTACCGTATA TTGTCAATCA AATAAATGGC
CCCTTGATTG ATATTCCTGC CATTTTAGCC GATCAACAAA CCATTAATAG CCTAGTGGAT
GGCCAAGATT ATCTGGCGCG TCTTTCTGCG CTGGCCCTCA TGGTGGGGCA AGTGCAATCC
AAAGTGGCCG AAGATGCTAA AGAAGGGGTG ATTCTTCCTA AGGCATTATT CCCTAATACA
TTGAAGTATC TGGCAAACTT TGTCGCCTCT CCAGCCGCAG AGCATAGCTT AGTGACAAGC
TTTGCGACTA AACTCAGTAA CGTGCCTGAA CTGACGCCAG AACAAGTACA GGCCTTAACA
GATAAAGCCA TTGCACAAGT AGAAACCAAC ATTTACCCAG CTTATCGCTC ATTAACGGCA
TTTATGTTGG CGCTGGAAGC TAAGGCGCCT ACCGAGGTGG GCATTTGGGC TCAGCCGAAC
GGAAAAGCCT TTTATCAGCA TGGGATAACC TATCTTGCCG ATTCAAGCCT CGGCGCCGAT
GCCATCCATC AACTGGGTAT TGATGAGGTG ACGCGTATAA CCAAGGAAAT GGACGCTATT
TTAAGCGCCA ATGGGTACAC TGAAGGCAGT GTTGGTGAGC GCATGCTAGT GCTTAATCAA
GAGCCTCGTT TCTTGTATGA AAATTCAGAC GCGGGCCGTC AACAATTACT TAATGATTTA
AGCGCTGAAA TTAAGCGGGT AATGGACAAG GCGCCTTCGC TGTTTTCAAG CTTACCGCCT
CAAGAAGTGG TGGTGAAACG CGTGCCCGTT GAAACCCAAG CCGGCGCAGC CGGTGGCTCT
TATGTACCTC CTGCACTGGA TGGTAGCAGA GCAGGGGTTT ACTTTATAAA CTTAATGGAC
ATGACCTCTA TTGTGAAATA CGGTCTAAAA ACCTTAACTT ACCATGAGGC TGTGCCCGGA
CATCATTTTC AAATTGCGCT GAATATGCAA CAAACCGACA TAGGCTTGAT GCGCCAGAAT
GCCTCTTTCA ATGCTTTCAT CGAGGGCTGG GCGTTATACG CCGAACAAGT GGCGTTCGAA
ATGGGCATGT ATGAAAACGA TCCTTGGGGC AACTTAGGTC GCCTACAAGC CGAAGTCTAC
CGCGCCGCTA GGTTAGTGGT GGACAGCGGA CTGCATCATA AAAAGTGGAG CCGTGCAGAG
GCGATTAGCT ACTTTGCGAC CGCGACAGGC TCAACAGAAG CCAATGTGGC GTCAGCCATC
GACAGGTATA TTGCCTGGCC GGGTCAAGCC TTAGGTTATA AGCTGGGTAT GTTAAAGATT
GTCGAGCTGC GCGAGCTTGC CAAAACGGCC TTAGGCGATA AGTTTGATAT CAGGCAATTT
CACGATTTGA TTTTATTGCC AGGGGCACGC CCTATGAGCG TGGTAGAAGC CGATGTTAAC
AACTGGATTG CTAAGAAAAA ATCATAA
 
Protein sequence
MFSPRLLSLA ILIALGGCSP DPIVETQPVE ISLSQASPQV NLASAEQQLE AAVANFASDF 
IQLQPAMATS LNLSQGQAGD FQRRLPDYSS QGVQAFKLQM QQAAHALASI EARGLSDEQQ
RHRLINQVIG QYYAGLADFN AGYIDTWAGH LPYIVNQING PLIDIPAILA DQQTINSLVD
GQDYLARLSA LALMVGQVQS KVAEDAKEGV ILPKALFPNT LKYLANFVAS PAAEHSLVTS
FATKLSNVPE LTPEQVQALT DKAIAQVETN IYPAYRSLTA FMLALEAKAP TEVGIWAQPN
GKAFYQHGIT YLADSSLGAD AIHQLGIDEV TRITKEMDAI LSANGYTEGS VGERMLVLNQ
EPRFLYENSD AGRQQLLNDL SAEIKRVMDK APSLFSSLPP QEVVVKRVPV ETQAGAAGGS
YVPPALDGSR AGVYFINLMD MTSIVKYGLK TLTYHEAVPG HHFQIALNMQ QTDIGLMRQN
ASFNAFIEGW ALYAEQVAFE MGMYENDPWG NLGRLQAEVY RAARLVVDSG LHHKKWSRAE
AISYFATATG STEANVASAI DRYIAWPGQA LGYKLGMLKI VELRELAKTA LGDKFDIRQF
HDLILLPGAR PMSVVEADVN NWIAKKKS