| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1458 |
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| Symbol | |
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| ID | 4017767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1693546 |
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| End bp | 1694760 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955468 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_562466 |
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| Protein GI | 91792815 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.586038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTC CTATCTATTT AGATTATGCC GCAACAACCC CAGTGGATCC TCGCGTTGCT
GAAAAAATGA TGCAACACAT GACGATGGAT GGTGTGTTTG GAAATCCAGC ATCCCGTTCA
CACAAGTATG GTTGGCAAGC CGAAGAAGCG GTGGATATTG CCCGCAATCA AGTGGCTGAT
TTGATTAACG CCGACCACAG AGAAATCGTG TTTACTTCTG GCGCGACTGA ATCAATCAAC
TTGGCGATCA AAGGCATTGC GCATTTCTAT CACAAGAAAG GCAAGCACAT CATCACCAGT
AAGACAGAAC ATAAAGCTGT GCTAGATACC TGTCGCCAAT TAGAGCGTGA AGGTTATGAG
GTGACTTACC TTGAGCCAGA AGCAAATGGC TTAATTCCTT TGGCGCGTAT CGAAGACGCC
ATGCGTGATG ACACATTGTT AGTGAGCATA ATGCATGTGA ATAACGAAAT CGGTGTTATT
CAAGATGTGA TGGCTATCGG TGAGTTATGT CGCTCAAAAG GCATTATCTT CCATATGGAT
GCTGCTCAAA GCGCAGGTAA ACTGCCAATC GACGTCCAGC AACTAAAAGT CGATTTGATT
TCTATCTCAG GCCATAAAAT GTACGGCCCT AAAGGGGTTG GTGCCCTTTA TGTTCGTCGT
AAGCCACGCA TTCGTTTAGA ATCACAAATG CACGGTGGTG GTCATGAGCG TGGTATGCGC
AGTGGTACCC TTGCGACTCA CCAGTTGGTG GGTTTAGGTG AAGCCGCAGC GATTGCCAAA
CAAGATATGG AAAGTGACAA TGCCCGTATC CGCACCCTAC GTGACAAGTT ATGGAATGGC
GTTAAGCACA TCGAAGAAAC TTATATCAAT GGCGACATGG AGCAGCGCTT TTGCGGCAGC
TTAAATGTCA GCTTCAACTT TGTTGAAGGT GAGTCCTTGA TGATGGCATT GAAAGACTTA
GCGGTATCTT CGGGTTCAGC CTGTACCTCA GCGAGTTTAG AGCCAAGCTA TGTGTTACGT
GCTTTAGGCT TAAATGATGA AATGGCTCAC AGCTCAATCC GCTTCTCAAT TGGCCGTTTC
ACCACAGATG AAGATATAGA TCATGCGATC AAAGTCATTA CCCAATCAAT AGATAAGCTG
CGTGAAATGT CGCCGCTATG GGAAATGTTT AAAGACGGTA TCGATTTGGA TCAAGTCCAA
TGGGCACATC ACTAA
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| Protein sequence | MKLPIYLDYA ATTPVDPRVA EKMMQHMTMD GVFGNPASRS HKYGWQAEEA VDIARNQVAD
LINADHREIV FTSGATESIN LAIKGIAHFY HKKGKHIITS KTEHKAVLDT CRQLEREGYE
VTYLEPEANG LIPLARIEDA MRDDTLLVSI MHVNNEIGVI QDVMAIGELC RSKGIIFHMD
AAQSAGKLPI DVQQLKVDLI SISGHKMYGP KGVGALYVRR KPRIRLESQM HGGGHERGMR
SGTLATHQLV GLGEAAAIAK QDMESDNARI RTLRDKLWNG VKHIEETYIN GDMEQRFCGS
LNVSFNFVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLNDEMAH SSIRFSIGRF
TTDEDIDHAI KVITQSIDKL REMSPLWEMF KDGIDLDQVQ WAHH
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