Gene Sden_1457 details

Gene Information

• Locus tag: Sden_1457
• ID: 4017766
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1692994
• End bp: 1693455
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637955467
• Product: iron-sulfur cluster assembly transcription factor IscR
• Protein accession: YP_562465
• Protein GI: 91792814
• COG category: [K] Transcription
• COG ID: [COG1959] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR00738] rrf2 family protein (putative transcriptional regulator); [TIGR02010] iron-sulfur cluster assembly transcription factor IscR

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.0691454
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTTA CATCAAAAGG TCGCTACGCA GTAACAGCCA TGTTGGATGT AGCGATTCAT 
TCAACAACAG GGCCGGTTCC CTTAGCCGAT ATCTCCGAAA GACAGGGAAT ATCGCTTTCT 
TATCTAGAAC AACTTTTTGC TAAGTTACGT AAAGAAGGTC TAGTCGCCAG TGTCCGTGGA 
CCAGGTGGCG GTTATCATTT AGGCCTAGAA GCAAAAGATA TCTCTATTAG CATGGTCGTG 
CATGCAGTAG ATGAATCTGT GGATGTGACT CGCTGTCAAG GCAAAGGAAA TTGCCAGAGT 
GGCACACGTT GCTTAACCCA TTCTTTATGG GGAGATCTCA GTAAGCAAAT TGCCGATTTT 
TTGGATGGTA TTTCGCTTGC TGGCTTGATG CAAAAGCGAG ATGTGCAATT TATTTCGTTA 
AAGCAAGACA AAATTCAGAA CGAGCATAGA TTGAGTCTTT AA 

 

Protein sequence

MKLTSKGRYA VTAMLDVAIH STTGPVPLAD ISERQGISLS YLEQLFAKLR KEGLVASVRG 
PGGGYHLGLE AKDISISMVV HAVDESVDVT RCQGKGNCQS GTRCLTHSLW GDLSKQIADF 
LDGISLAGLM QKRDVQFISL KQDKIQNEHR LSL