| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1445 |
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| Symbol | |
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| ID | 4017754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1682820 |
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| End bp | 1685297 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955455 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_562453 |
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| Protein GI | 91792802 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000476077 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCGT TACGTTTATC TCTACTTGCT CTTGCTTGCC ATAGCGCACT GTTTGCCGTT
ACTGCCAGTG CTCACACTAC TATCCTCGCC TCACAAACGT CAGCCACGTC TGAGGCACAG
ACTAATAAGG CCCGTGATAA CAAGGATGTT GAGCGTATAA CCGTCTATGG AAGACAAAAC
CAAGTGGTGA TGAATTCAGG CCTTGCCACC AAGTCTGATA TGTCATTGAT GGAAACCCCA
GCGGCAGTTG TGATTGTCGA TGAGGCGCTT TTCGATGCAC AAGGCTTAAG CAATATGCAA
GACTTGGTAC GTAATATCAG CGGCGTAACT CAAGCTGGCA ACAACTATGG CATAGGCGAT
AACCTAGTGG TACGCGGCCT AGGCGCTAAC TATACCTATG ACGGCATGTA TGGCGGCGCA
GGCTTAGGCA ACACCTTTAA CCCGACACGC TCACTGGCAA ACGTGAGCTC GGTTGAAGTG
TTAAAAGGCC CAGCAACCGG CCTTTATGGC ATGGGTAGCG CCGGTGGCGT TATTAACCTC
ATTGAGAAAA AACCAGAATT TACTAGCCAA CATGAGTTTG AGCTGGAGCT AGGTCAGTGG
GACAGCTATT CAATGCTTGC CGACAGTACT GGCGCTATTA GCGATGATTT AGCCTATCGT
GTTGTCGCTA AAAGCGCCCG CAGTGACGGT TACCGTGACA TGGGCACCGA CAGAGATGAA
GTTTACGGCT CATTAAAGTT TTTGATTAAT GATGACCAAA ACATCATGTT ATCAGCCGCC
TACATTAAAG ATGCTATCCC AGTAGACTCT ATCGGCCACC CCATCCGTAT TTATAATGCT
GAGTCAGTCA ATGGCAAAAC TGCGGGAGAA GCCACCTGGC AAGACCTAGT CAATGACCCC
GGTAGCAAAG GCATACAGCT TACAGATCTT CAGCGTCAAG AATTGGCAAA CTCCTTAAGT
TCAAGCGATG GCCTAACTCC TTATACTTTC GGACACAAGG GCTTAATCTC CCCAATGGCC
AAAGCCAACG AAGGCGAGGA GCTGCGTCTT AAGCTGACTC ACAATATCTA CTTAAGCGAC
AATCTGCATT TAAATCAGCA GCTGCAATAC CGTAACTATG ACACCGGCTT TGCTCGCCAA
ACGGGTGCCT ATAACTATGT GTACTGGGAA CAAAGCGAGG GTATCAATGT TGCTCCTCGT
GCGCCGCTGC TAGAAGATGG CAAGTTATAC CCCTTTGCCG CTCGCCGTCA GGAATACCGT
AAAGCCAGCG CAGATGAAAA ATCATGGCAG TACTTTGCTG ATTTACGCTA CGACTTCGAA
CTTGCAGGCA TAGACAATGA ACTGTTAATG AATGCAAATT TTGAAGACAG AAGCATACGC
TCACAGCAAT ATTCAATCTG GGATAAAGAC TACATAATCA AAGATAAAAA AGGCCAGCTG
CTGTATCAAG GCAGCCTACC CTACATCTAT GATATCCGTA ACCCTAACTG GGGCACGGGA
CAATTTGAGG ATTACGATCC GCTGCGTACT AGTAACTACG ACAAAGCCAT CAGTGCTTGG
GGCTTAGGCG TTCAACACGT AGGTTACTTA GGCAATGGTT TTACCAGCCG TATCGGAGTC
GCGTTTAATG AAATCAAGCA AGCTTACGAG CATTTAGGTG TCGATGCCCG CTACAGCGCA
AGTCGCGCAG AGCCAACGCA ACTGGCTGAT ACCACAGATA ACGGCATGAC CTATAACTTA
GGCTTAACCT ATATGCCAAC CGATGATTTA TCTTTCTTCA TCAACCATGC AAAAGGCCGT
ACGGCCTACA GTGTGCTTGG TGATATTAAG GGCGATCAAA GCGACAGAGA AGATTCTGAG
TCAGTCAGCA AAGATTTTGG CATAAGAGCC AAAGGGTTTG ACGATCAATT ACTGGCCTCA
TTAATTTTCT TTAAAACGTC ACGTACTAAC TTGCAATACG GCAATCCACT CTATAATTCT
GACGTGTCTG GCCCTGAAGT ACCACAGTAT TTCAATAACG GCAGTGAAGA CACTGAAGGT
GTAGAGCTTG ATATCAACGC CACTCTTAAC CAGCAATGGA CAATCAATGT CAATGCTGTC
TACCAAGACG CCAGAGATAA CCAAGACCCA AGCCGAAGTG ATGCAAATCA ACGTCAAAAA
GGCGTGCCAT ACGTCACCGC TGGCATGTGG GCAAGCTACG CCGCTGACTT TGGCTTACGT
GAGCCTATTT CCCTTAGTTT AGGCGGAAAG TACGTCGGCG AGCGCAGCAC ACACTCAAGC
CGATTCGGTA TTCCAGACGG CCATGTGCCA AGTTATGCCG TTATGGACTC AGCCATCAGC
TATGATGCCC AAGACTATAA GATCCAGTTA AACATTAACA ACTTGTTTAA TAAGGTCTAT
TATGAGAAAG CTATGTTCCT GGGCGGCATG CCAGGGGAAG AGCGTAACGC TAAGCTAACC
TTAACTTACC GTCTGTAA
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| Protein sequence | MKSLRLSLLA LACHSALFAV TASAHTTILA SQTSATSEAQ TNKARDNKDV ERITVYGRQN
QVVMNSGLAT KSDMSLMETP AAVVIVDEAL FDAQGLSNMQ DLVRNISGVT QAGNNYGIGD
NLVVRGLGAN YTYDGMYGGA GLGNTFNPTR SLANVSSVEV LKGPATGLYG MGSAGGVINL
IEKKPEFTSQ HEFELELGQW DSYSMLADST GAISDDLAYR VVAKSARSDG YRDMGTDRDE
VYGSLKFLIN DDQNIMLSAA YIKDAIPVDS IGHPIRIYNA ESVNGKTAGE ATWQDLVNDP
GSKGIQLTDL QRQELANSLS SSDGLTPYTF GHKGLISPMA KANEGEELRL KLTHNIYLSD
NLHLNQQLQY RNYDTGFARQ TGAYNYVYWE QSEGINVAPR APLLEDGKLY PFAARRQEYR
KASADEKSWQ YFADLRYDFE LAGIDNELLM NANFEDRSIR SQQYSIWDKD YIIKDKKGQL
LYQGSLPYIY DIRNPNWGTG QFEDYDPLRT SNYDKAISAW GLGVQHVGYL GNGFTSRIGV
AFNEIKQAYE HLGVDARYSA SRAEPTQLAD TTDNGMTYNL GLTYMPTDDL SFFINHAKGR
TAYSVLGDIK GDQSDREDSE SVSKDFGIRA KGFDDQLLAS LIFFKTSRTN LQYGNPLYNS
DVSGPEVPQY FNNGSEDTEG VELDINATLN QQWTINVNAV YQDARDNQDP SRSDANQRQK
GVPYVTAGMW ASYAADFGLR EPISLSLGGK YVGERSTHSS RFGIPDGHVP SYAVMDSAIS
YDAQDYKIQL NINNLFNKVY YEKAMFLGGM PGEERNAKLT LTYRL
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