Gene Sden_1438 details

Gene Information

• Locus tag: Sden_1438
• ID: 4017427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1676900
• End bp: 1677448
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637955446
• Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
• Protein accession: YP_562447
• Protein GI: 91792796
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0558] Phosphatidylglycerophosphate synthase
• TIGRFAM ID: [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.173652
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTTTA ATATACCCAT AGCACTGACA TTATTTCGTA TTGCCTTGTT GCCCGTGTTC 
ATTTTCTTCT TTTACTTACC CCATTCTTGG GCACCTTTTG CCTCAGCCTT TATATTTTGG 
CTCGCCGCCG TCACAGATGC ACTGGATGGT TATGCGGCTC GCAAACTTAA GCAGTCAACT 
CGCTTTGGCG CATTTTTAGA TCCAGTTGCC GACAAAGTGA TGGTGACTAC AGCCTTAGTC 
TTGCTGGTGC AGCAAAATGA TAATATTTAT CTCACTTTGG CGGCCTTGTT TATGATCGGC 
CGTGAGATCG TCATTTCAGC CCTGAGAGAG TGGATGGCGG AAATTGGCAA ACGGGGGGTG 
GTGGCTGTGT CTTGGATAGG TAAATACAAG ACAGCGGCAC AAATGGTGGC CATAGTGGGG 
CTAATTTGGA AACCTACTCC ATTGTTGACC GATCTGGCTT ATGTCTGCTT CTACGTGGCG 
GCCGTGCTGA CATTCTGGTC TATGATAAGT TACATATCAG CAGCTTGGAA AGATTTGGTC 
GCAGAATAG 

 

Protein sequence

MPFNIPIALT LFRIALLPVF IFFFYLPHSW APFASAFIFW LAAVTDALDG YAARKLKQST 
RFGAFLDPVA DKVMVTTALV LLVQQNDNIY LTLAALFMIG REIVISALRE WMAEIGKRGV 
VAVSWIGKYK TAAQMVAIVG LIWKPTPLLT DLAYVCFYVA AVLTFWSMIS YISAAWKDLV 
AE