Gene Sden_1427 details

Gene Information

• Locus tag: Sden_1427
• Symbol: recR
• ID: 4017452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1662243
• End bp: 1662842
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637955435
• Product: recombination protein RecR
• Protein accession: YP_562436
• Protein GI: 91792785
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000000710068
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTCA GTCCCCTCGT CGATGAGTTA ATCCAAGCCC TGAAGGGTTT ACCTGGTGTT 
GGCCCCAAAT CTGCCCAGCG TATGGCATTC AATCTACTAG AGCGGGACCG AAAAGTCGGG 
CTTAAGTTAG CCGAGTCCTT AAAGAATGCC ATGACAGACG TGGGTCATTG CCAATCTTGC 
CGCACCTTTA CCGAGCAAAG CTTATGCCCC ATTTGTGCTA GCCATAAGCG CGGCGCCTCA 
GGGGTGATTT GTGTGGTAGA AACCCCTGCC GATGTATTGG CAATAGAAGC GGGCGGGCAT 
TTTAATGGCC GTTACTTTGT GCTCTTGGGC CACTTGTCAC CGTTAGATGG TGTGGGTCCT 
GAAGAGCTGG GCTTAAGTTT ACTGGAGCAG CATTTACAGA CCCTAGACGT GACTGAACTG 
ATTTTAGCCA CTAACCCTAC GGTAGAAGGC GATGCCACGG CGCATTTTAT TGCCGATATG 
GCCCGTCGTC ACAAGGTGAT CATTAGCCGT ATCGCCCACG GCGTTCCTGT GGGCGGTGAA 
CTTGAGTATG TGGACAGCAC CACCTTAGCC TTATCATTTA ATGGCCGTAT TGCCCTCTGA 

 

Protein sequence

MKFSPLVDEL IQALKGLPGV GPKSAQRMAF NLLERDRKVG LKLAESLKNA MTDVGHCQSC 
RTFTEQSLCP ICASHKRGAS GVICVVETPA DVLAIEAGGH FNGRYFVLLG HLSPLDGVGP 
EELGLSLLEQ HLQTLDVTEL ILATNPTVEG DATAHFIADM ARRHKVIISR IAHGVPVGGE 
LEYVDSTTLA LSFNGRIAL