| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1419 |
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| Symbol | |
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| ID | 4017444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1655508 |
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| End bp | 1657622 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955427 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_562428 |
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| Protein GI | 91792777 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGTAG TCATAAAAAG AGATGGATGT CGTACAGTAT TTAATGCCGA GCGTATTCAA
GAGGCCGTTA TCGCGGCCAT GGCATCGGCG AACAAACAAG ATGTGGATTA TGCCTGCACC
TTGGCAGAGC AGGTTAGGCA ACAAATGCAA GGCAAGCGAG AAGTCGACAT ACACGAGCTG
CAAGATGCCG TTGAAAACTT ACTCATGGCG GGCCCTTATA AAGCCGTGGC CCGCCATTAT
ATTGAATATC GCCATGACAG AGACTTATGC CGTGAAGCCA AGAGCAAGCT CAACCAGCAG
ATTTTAGGCT TAGTAGAGCA AAGTGATGCA GCACTTTTGA ATGAAAATGC CAATAAAGAT
GCCAAAGTCA TCCCAACTCA ACGTGATTTG TTAGCGGGCA TTGTCGCCAA GCATTATGCC
AAAAGCCATT TATTGCCAAA AGACGTGGTT CAAGCTCATG AGCGCGGTGA GCTGCATTAT
CACGACTTAG ATTATGCGCC GTTTTTCCCC ATGTTTAACT GCATGCTTAT CGACTTAGGC
GGCATGCTCA CCAAGGGCTT TAAGATGGGT AATGCCGAAA TTGAGCCGCC TAAATCCATA
GCTACGGCGA CAGCCGTTAC AGCGCAAATT ATCGCTCAGG TTGCCAGCCA CATTTATGGC
GGCACCACCA TTAACCGTAT CGATGAAGTA TTGGCAGAAT TTGTCACTAA GAGCTACCAA
AAACATTTAG CGACAGGCAT AGAGTGGCAA GTGGCAGACG CAGCAAAGTA CGCGCTATCC
CTAACAGAAA AAGAGTGTCA CGATGCTTTT CAATCCCTTG AATATGAAGT AAATACCTTG
CACACGGCTA ACGGGCAAAC CCCGTTTGTG ACCTTTGGTT TTGGTTTAGG CACCTCTTGG
GAGTCAAAAC TCATCCAACG CTCCATGCTC AATGTGCGCC TCGAAGGCCT AGGTAAAAAC
CGCAAGACAC CGGTATTCCC AAAGCTTGTG TTTGCCATTA AAGCGGGACT GAATCATAAG
CTGGGTGACA ACCACTATGA CATCAAACAG CTGGCGCTTA AGTGTGCAAG CCTGAGAATG
TATCCCGATA TTCTTAATTT TGATCAAGTG GTTAAGGTCA CAGGTTCCTT TAAAACCCCC
ATGGGTTGCC GCTCGTTCCT TGGCGCCTAT GAAGCAAATG GCGAGCTTAT CCATGAAGGT
CGCAATAACT TGGGGGTGGT GAGTTTGAAC TTACCGCGAA TAGCTATTGA GGCTAAAGGT
GATGAAGCTG CCTTTTATCA ATTGCTAGAT GCTCGTTTAC TTGTCGCTAA AAAAGCCTTA
GATAGCCGCA TCAGCCGTCT CGATGGTGTA AAAGCTCGGG TTGCGCCGAT CCTCTATATG
GAAGGGGCTT GTGGCGTGCG CTTAAAGGCT GATGATGAGA TAAGCAGTAT CTTTAAACAT
GGTCGCGCAT CCATTTCATT AGGCTTTATT GGCTTACATG AAACCATTCA GGCACTTTTT
GGCCAAGAAC ATGTCTTTGA TAGTGCTATT TTGCGAGAAA AAGCCCTTGA AATTATTCGC
TATCTAAAAC AAACAACAGA TGCATGGAAG GCAGAAACGG GTTACGGCTT TAGTTTATAC
AGCACCCCAA GTGAGAACCT CTGCAGCCGC TTTTGCGAGC TCGATAGCAG TGAGTTTGGA
CTCATTAAAG GCGTGACAGA CAAAGGCTAT TACACCAATA GTTTTCATTT AGACGTTGAG
AAGAAAGTTA ACCCCTTCGA TAAACTGGAT TTTGAAATGG CCTATCCCGC TATCACCAAT
GGCGGCTTTA TTTGTTACGG TGAATACCCC AATATGCAGC ATAACTTATC GGCACTGGAG
CAAGTGTGGG ATTACAGTTT TAGTCGGGTG CCCTATTACG GCACCAATAC CCCAATTGAT
GAGTGTTATG ACTGCGGCTT TTTAGGTGAA TTTAACTGTA CCAGCAAGGG CTTTGTCTGC
CCAAAATGCG GCAATCATGA GCCTAGCCGC GTGAGTGTGA CTCGAAGGGT CTGTGGTTAT
TTAGGCAGCC CTGATGCCCG GCCCTTTAAT GCGGGTAAGC AAGAAGAAGT GAAGCGCCGC
GTCAAGCATT TGTGA
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| Protein sequence | MLVVIKRDGC RTVFNAERIQ EAVIAAMASA NKQDVDYACT LAEQVRQQMQ GKREVDIHEL
QDAVENLLMA GPYKAVARHY IEYRHDRDLC REAKSKLNQQ ILGLVEQSDA ALLNENANKD
AKVIPTQRDL LAGIVAKHYA KSHLLPKDVV QAHERGELHY HDLDYAPFFP MFNCMLIDLG
GMLTKGFKMG NAEIEPPKSI ATATAVTAQI IAQVASHIYG GTTINRIDEV LAEFVTKSYQ
KHLATGIEWQ VADAAKYALS LTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGTSW
ESKLIQRSML NVRLEGLGKN RKTPVFPKLV FAIKAGLNHK LGDNHYDIKQ LALKCASLRM
YPDILNFDQV VKVTGSFKTP MGCRSFLGAY EANGELIHEG RNNLGVVSLN LPRIAIEAKG
DEAAFYQLLD ARLLVAKKAL DSRISRLDGV KARVAPILYM EGACGVRLKA DDEISSIFKH
GRASISLGFI GLHETIQALF GQEHVFDSAI LREKALEIIR YLKQTTDAWK AETGYGFSLY
STPSENLCSR FCELDSSEFG LIKGVTDKGY YTNSFHLDVE KKVNPFDKLD FEMAYPAITN
GGFICYGEYP NMQHNLSALE QVWDYSFSRV PYYGTNTPID ECYDCGFLGE FNCTSKGFVC
PKCGNHEPSR VSVTRRVCGY LGSPDARPFN AGKQEEVKRR VKHL
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