Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1407 |
Symbol | |
ID | 4017344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1639087 |
End bp | 1640010 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637955415 |
Product | siroheme synthase |
Protein accession | YP_562416 |
Protein GI | 91792765 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
TIGRFAM ID | [TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.117036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTATT TTCCGCTATT TGTCGATACC CAGGCACTGT CTGTGCTGAT TGTTGGTGCG GGAGAGGTCG CTAGTAGAAA ACTGGCTTTA CTTGCCAGAA CCGACGCGCG TATTCAGGTT TTGGCGCCAG CAACCACGGC CGAAGTGGAT GAATTTGAGG CTGAAGGGCG GATCGCACTG GAGCGCCGTC CAGCGACACT TGAGGACATG CAGGGATTCG ATCTTATCTA TCTTGCTACC GCGAACGAAC AGCTTAATAT TGACCTTGCA GAGGCAGCCA CACAAGCCGG TATTTGGTGC AATGTGGTGG ATAATCCTAA ATATTGCCGC TTTATCACCC CCTCCATCAT AGACAGGGGC CGCTTGGTGG TGGCTATTAG CACCGCAGGC GCAGCGCCCG TATTCGCTAG AAGTTTACGA GCACGGCTTG AATCTTGGCT ACCGCAATCT TTATCTCCAT TATTTGATTT TGTGGCTCAG CGCCGTGATG AAGTGCAGCA AAATGTTGCG GCTCCTAAGT CGAGACGTTT GTTGTGGGAG CACTTTTTTG ACCTTAATGG CGACAAGTGG GATAACGATA CCCCAACGCA TTTCCAGCAA GCGATGACGT TAGCCCAAGA CAACAGCCAG CGACAGGGAC GACTATTGTT ACTCGATAGT TGCATAGAGG CGCAATGGCT ACCATTGGCT GTGATGCCGC TGTTTTCTCA GCTTGATTGT ATCTATTCCG ACTTATCCAT ACCCTTTAAA ATTAATGAAC TGCTAAGGCG TGATGCCAAT CGAGCGGGGA TTCCTCACTT TACCCAGTTA ACAGGGCGCT TAGCTCAAGG TGAACGCATG CTAATTTTTG CCAATCCCGT TGAGATTGCA GCCTTACAAG ACCAATTTCC TCAAGCTCAA TCTATTAAGC CGGGTTCATT ATAG
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Protein sequence | MQYFPLFVDT QALSVLIVGA GEVASRKLAL LARTDARIQV LAPATTAEVD EFEAEGRIAL ERRPATLEDM QGFDLIYLAT ANEQLNIDLA EAATQAGIWC NVVDNPKYCR FITPSIIDRG RLVVAISTAG AAPVFARSLR ARLESWLPQS LSPLFDFVAQ RRDEVQQNVA APKSRRLLWE HFFDLNGDKW DNDTPTHFQQ AMTLAQDNSQ RQGRLLLLDS CIEAQWLPLA VMPLFSQLDC IYSDLSIPFK INELLRRDAN RAGIPHFTQL TGRLAQGERM LIFANPVEIA ALQDQFPQAQ SIKPGSL
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