Gene Sden_1360 details

Gene Information

• Locus tag: Sden_1360
• ID: 4017607
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1580418
• End bp: 1581032
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637955357
• Product: antioxidant Tpx
• Protein accession: YP_562369
• Protein GI: 91792718
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2077] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000000292969
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATACTCA ATATAAATGG GAGCCAGTTT GTGAATAAAA TAGGTCAGTT TTTTAAAATA 
GTGCTGACGC TGAGCGTTGT TTTTGCGACA AGTGCTAATG CTAAAGAACA TAGTGTGATT 
TTAGCTGGGC AAGTGACGCC ACTACTTGGC ACTATGCCAA GCCTAAACCA GCCCGCGCCG 
AGTTTTAAGG TGGTCGATGA TAAGTTTACC CCGGTGAGTT TAGCCGACTT TGCCGGTAAG 
ACAGTGCTCA TCAGTGCCGT GCCAAGCTTA GATACCGGCG TTTGTGCGCT ACAGACTAAG 
CGTTTTAATA CTGAAGTCAG TCAGTTCTCT GACGATGTTG TGATGTTGAC CTTGAGCATG 
GACTTACCTT TTGCGCAAAA ACGTTTTTGT CAGCTAGAAA ATGTCGACAA GTTAAAGGTA 
TTGTCAGATT CTGTGTGGCG TAACTTTGGT GAGCAGTACG GACTTATCAT TAAAGATAGA 
GGTCTACTGG CCAGAGCCAT CTTCATCATA GACAGCAAAG GGGTTTTACG ATACCAAGAG 
TTGGTCAGTG ATGTGAGCCA ACATCCAGAT TACAGCCAGG CGTTAAGCAC GCTTAAGCAA 
ATTTCGGCCC AATAG 

 

Protein sequence

MILNINGSQF VNKIGQFFKI VLTLSVVFAT SANAKEHSVI LAGQVTPLLG TMPSLNQPAP 
SFKVVDDKFT PVSLADFAGK TVLISAVPSL DTGVCALQTK RFNTEVSQFS DDVVMLTLSM 
DLPFAQKRFC QLENVDKLKV LSDSVWRNFG EQYGLIIKDR GLLARAIFII DSKGVLRYQE 
LVSDVSQHPD YSQALSTLKQ ISAQ