Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1358 |
Symbol | |
ID | 4017605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1578944 |
End bp | 1579573 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637955355 |
Product | OmpA/MotB |
Protein accession | YP_562367 |
Protein GI | 91792716 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000545475 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTACGTT TAGCCTTAGG CCTATGGCTG GTTTTTTTTA GCTTCTCAGC CCTTGCTTGG GTTGATACTG ATGCAGACGG TGTACCGGAT AAGAAAGATG CTTGTGCCAA TAGCCCTAAA GGCGTCATAG TCGAGGCTAA CGGCTGTCAT CAGGTGGAAT TGTCCGTTCA GCAAGAGCCT GAAATTGAGC CGTCTGACTT TGACAGCATG GAACAAGTAC AAACAGCCGC AATAACACAA AACTGTGTAC TGGATGAAAC CTCTGAATTT AATTTAAGTG CTTGTGATAG CATTGATATA GCGCCTGTAT ATTTTGAATT CGCTAAATCT CAAGTATTGC AAACACAAAA GCCTTTGCTG AAAAAAATCG CTATGCTTGC CAATCAAAGC GGTGCGAAGA TAACCTTGGT TGGTCACACT GATATCATAG GTAGCGAAGC ATTTAATCAA AATTTATCAT TAAAGCGCGC CATGAATGTG AGTGCCGTAC TCGTGGCTGA GTATGGTTTA ATGGCATCTG ATATACATTA TTATGGTGTG GGTTCAACAG AGCCTGCCGA TGATAATGCC ACCGCGAACG GTCGTCAGGC CAATCGACGG GTTGAAATTA CCATAACATT AGAAGACTAA
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Protein sequence | MLRLALGLWL VFFSFSALAW VDTDADGVPD KKDACANSPK GVIVEANGCH QVELSVQQEP EIEPSDFDSM EQVQTAAITQ NCVLDETSEF NLSACDSIDI APVYFEFAKS QVLQTQKPLL KKIAMLANQS GAKITLVGHT DIIGSEAFNQ NLSLKRAMNV SAVLVAEYGL MASDIHYYGV GSTEPADDNA TANGRQANRR VEITITLED
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