| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1351 |
|---|
| Symbol | |
|---|
| ID | 4017637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1571362 |
|---|
| End bp | 1571856 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637955348 |
|---|
| Product | CheW-like protein |
|---|
| Protein accession | YP_562360 |
|---|
| Protein GI | 91792709 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAT CAAGAAAAGT CGCAGCAGTA GCTGCAAGTA AAGATGATGC AGTACTACAG
TGGGTGACAT TTAAATTAGA TAATGAAACC TATGGCATTA ACGTAATGCA AGTTCAAGAA
GTGTTACGAT ATACAGAAAT TGCTCCTGTT CCTGGTGCGC CTCATTATGT ACTGGGTATC
ATTAATTTAC GCGGTAGCGT AGTTACTGTT ATCGATACCC GTTCGCGTTT CGGGTTAAAC
TCCGCCGAAG TCGATGATTC GACTCGTATC GTTATTATCG AAGCAGAGAA ACAAGTTATT
GGTATTATGG TCGATAGCGT TGCTGAAGTG GTTTATTTGC GACGTTCTGA AATTGACAAC
GCGCCGAATG TGGGTACAGA AGAAAGCGCT AAATTTATTC AAGGCGTAAG TAATAGAGAC
AATGAACTAC TCATTCTGGT TGATTTAGAT AAGTTATTAT CTGATGAAGA ATGGGCCGAG
TTGACTGACG TCTAG
|
|---|
| Protein sequence | MTESRKVAAV AASKDDAVLQ WVTFKLDNET YGINVMQVQE VLRYTEIAPV PGAPHYVLGI
INLRGSVVTV IDTRSRFGLN SAEVDDSTRI VIIEAEKQVI GIMVDSVAEV VYLRRSEIDN
APNVGTEESA KFIQGVSNRD NELLILVDLD KLLSDEEWAE LTDV
|
|---|
| |