Gene Sden_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1341 
SymbolflhF 
ID4017627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1561521 
End bp1562909 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content46% 
IMG OID637955338 
Productflagellar biosynthesis regulator FlhF 
Protein accessionYP_562350 
Protein GI91792699 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID[TIGR03499] flagellar biosynthetic protein FlhF 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.672672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATTA AACGATTTTT TGCCAAAGAT ATGCGCGCAG CATTAGCTCA AGTCAAAGAC 
ACCTTAGGCT CTGATGCCGT CATCATGTCC AATAAAAAAG TGACAGGCGG CATCGAAATA
GTCGCTGCAG TGGATTATGA TGAGCCCAAA GTGAGCGCTA AGGTGAACAC CCCAGTCCCA
GGTTTTATGG ACGTGAGCGA AGACAGAGTG TCCCTAGGGG CTAAACCTGC CATTAAGGCC
GAGACTAAAT TAAACCCGCC ACCGGCGGCT GATTCTTTAC AAGCGTTACT AGAGAAACAG
CATTCTAGAT TAAAGCAGCA AATGGCATCT CAGAATAATG AACCTGAACT GCCGGAGTGG
GCTAGACAAT TAGAGGCTTC AAAAAAGCCA AAGCCTGTGG CTAACTTTCA GCATCAGGCG
TCTTTGTCTG ATACTCCCCA GAAGCACAGC AAGCACAACC AAGCGGACTT CGATGCACTT
AAAGATGAAA TGGCGTCGCT GCGAAACTTG CTGACTCATC AAGTGTCCGC GTTGATGAAA
GATCAGAAAA AACGCACCGA CCCTATGGGT GCTATGCTTG AAAGTAAGCT ATTGGCCGCT
GAGTTTTCAG CCCCAATCGC TGCTAAGCTT GCTGGATTAA GTCAGCATTA CACCCCAGTG
GATTTAGTAC GTGCACTGCC TCAGACTTTA GCTAATCTTC TTGATAATCA AGGTGATGAT
ATAGTTAGGC GCGGTGGGGT TGTTGCCTTT GTCGGGCCTA CTGGAGTCGG GAAAACAACA
TCCTTGGCCA AGCTGGCGGC CAGATTTGCA GCTCAGCATG GTCCAGAGCA AGTCGCGCTC
ATTACCACAG ATCATTATCG TATAGGGGCT TTCGAACAGC TAGCAACCTA TGGCAAAATA
ATGGGGTGCC CTGTTAAGCA GGCTCATGAT CTTGCTGAAT TAGAACAAAT TATTTATCAG
TTTAGGAATC GCAAGCTAGT ATTAATTGAT ACAGCTGGTA TGGGGCAGCG TGATATGCGC
CTCTATCAGC AGCTTGATAA TCTGACTGCC AATAGCAAAA TTCCTATTCG CAGCTACTTG
GTTCTTTCCG CTACAGGCCA ACGCCGAGTA CTACAAGACG CGGTGACCCA TTTTAAACGC
ATTCCTTTAT CAGGGGTTGT GCTGACTAAA CTGGATGAAT CGGTATCCAT TGCCGGAGCA
TTGAGTGTGT TAATTCAAAA TGAACTGCCT TTAAGTTATG TGACTGATGG CCAAAGGGTT
CCAGAAGACA TGAAAGTGGC AGATACCTTA GTATTAGCCA AACAAGCACT AGCTGCTATG
AACGAAACTG AACTACAATC GACAAAAGAC ACGGCGTGGT CAAATGACAT GGCCTATGCA
TTCGAGTAA
 
Protein sequence
MKIKRFFAKD MRAALAQVKD TLGSDAVIMS NKKVTGGIEI VAAVDYDEPK VSAKVNTPVP 
GFMDVSEDRV SLGAKPAIKA ETKLNPPPAA DSLQALLEKQ HSRLKQQMAS QNNEPELPEW
ARQLEASKKP KPVANFQHQA SLSDTPQKHS KHNQADFDAL KDEMASLRNL LTHQVSALMK
DQKKRTDPMG AMLESKLLAA EFSAPIAAKL AGLSQHYTPV DLVRALPQTL ANLLDNQGDD
IVRRGGVVAF VGPTGVGKTT SLAKLAARFA AQHGPEQVAL ITTDHYRIGA FEQLATYGKI
MGCPVKQAHD LAELEQIIYQ FRNRKLVLID TAGMGQRDMR LYQQLDNLTA NSKIPIRSYL
VLSATGQRRV LQDAVTHFKR IPLSGVVLTK LDESVSIAGA LSVLIQNELP LSYVTDGQRV
PEDMKVADTL VLAKQALAAM NETELQSTKD TAWSNDMAYA FE