Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1341 |
Symbol | flhF |
ID | 4017627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1561521 |
End bp | 1562909 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637955338 |
Product | flagellar biosynthesis regulator FlhF |
Protein accession | YP_562350 |
Protein GI | 91792699 |
COG category | [N] Cell motility |
COG ID | [COG1419] Flagellar GTP-binding protein |
TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.672672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATTA AACGATTTTT TGCCAAAGAT ATGCGCGCAG CATTAGCTCA AGTCAAAGAC ACCTTAGGCT CTGATGCCGT CATCATGTCC AATAAAAAAG TGACAGGCGG CATCGAAATA GTCGCTGCAG TGGATTATGA TGAGCCCAAA GTGAGCGCTA AGGTGAACAC CCCAGTCCCA GGTTTTATGG ACGTGAGCGA AGACAGAGTG TCCCTAGGGG CTAAACCTGC CATTAAGGCC GAGACTAAAT TAAACCCGCC ACCGGCGGCT GATTCTTTAC AAGCGTTACT AGAGAAACAG CATTCTAGAT TAAAGCAGCA AATGGCATCT CAGAATAATG AACCTGAACT GCCGGAGTGG GCTAGACAAT TAGAGGCTTC AAAAAAGCCA AAGCCTGTGG CTAACTTTCA GCATCAGGCG TCTTTGTCTG ATACTCCCCA GAAGCACAGC AAGCACAACC AAGCGGACTT CGATGCACTT AAAGATGAAA TGGCGTCGCT GCGAAACTTG CTGACTCATC AAGTGTCCGC GTTGATGAAA GATCAGAAAA AACGCACCGA CCCTATGGGT GCTATGCTTG AAAGTAAGCT ATTGGCCGCT GAGTTTTCAG CCCCAATCGC TGCTAAGCTT GCTGGATTAA GTCAGCATTA CACCCCAGTG GATTTAGTAC GTGCACTGCC TCAGACTTTA GCTAATCTTC TTGATAATCA AGGTGATGAT ATAGTTAGGC GCGGTGGGGT TGTTGCCTTT GTCGGGCCTA CTGGAGTCGG GAAAACAACA TCCTTGGCCA AGCTGGCGGC CAGATTTGCA GCTCAGCATG GTCCAGAGCA AGTCGCGCTC ATTACCACAG ATCATTATCG TATAGGGGCT TTCGAACAGC TAGCAACCTA TGGCAAAATA ATGGGGTGCC CTGTTAAGCA GGCTCATGAT CTTGCTGAAT TAGAACAAAT TATTTATCAG TTTAGGAATC GCAAGCTAGT ATTAATTGAT ACAGCTGGTA TGGGGCAGCG TGATATGCGC CTCTATCAGC AGCTTGATAA TCTGACTGCC AATAGCAAAA TTCCTATTCG CAGCTACTTG GTTCTTTCCG CTACAGGCCA ACGCCGAGTA CTACAAGACG CGGTGACCCA TTTTAAACGC ATTCCTTTAT CAGGGGTTGT GCTGACTAAA CTGGATGAAT CGGTATCCAT TGCCGGAGCA TTGAGTGTGT TAATTCAAAA TGAACTGCCT TTAAGTTATG TGACTGATGG CCAAAGGGTT CCAGAAGACA TGAAAGTGGC AGATACCTTA GTATTAGCCA AACAAGCACT AGCTGCTATG AACGAAACTG AACTACAATC GACAAAAGAC ACGGCGTGGT CAAATGACAT GGCCTATGCA TTCGAGTAA
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Protein sequence | MKIKRFFAKD MRAALAQVKD TLGSDAVIMS NKKVTGGIEI VAAVDYDEPK VSAKVNTPVP GFMDVSEDRV SLGAKPAIKA ETKLNPPPAA DSLQALLEKQ HSRLKQQMAS QNNEPELPEW ARQLEASKKP KPVANFQHQA SLSDTPQKHS KHNQADFDAL KDEMASLRNL LTHQVSALMK DQKKRTDPMG AMLESKLLAA EFSAPIAAKL AGLSQHYTPV DLVRALPQTL ANLLDNQGDD IVRRGGVVAF VGPTGVGKTT SLAKLAARFA AQHGPEQVAL ITTDHYRIGA FEQLATYGKI MGCPVKQAHD LAELEQIIYQ FRNRKLVLID TAGMGQRDMR LYQQLDNLTA NSKIPIRSYL VLSATGQRRV LQDAVTHFKR IPLSGVVLTK LDESVSIAGA LSVLIQNELP LSYVTDGQRV PEDMKVADTL VLAKQALAAM NETELQSTKD TAWSNDMAYA FE
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