Gene Sden_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1337 
Symbol 
ID4017623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1557025 
End bp1557294 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content40% 
IMG OID637955334 
Productflagellar biosynthetic protein FliQ 
Protein accessionYP_562346 
Protein GI91792695 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCCTG AAGCCTTGAT TGATATATTT CGTGAAGCTT TATCTGTCAT CGTACTTATT 
GTGTCGGCAA TTATTTTGCC AGGTTTATTT ATCGGTTTGA TTGTGGCGGT GTTTCAAGCG
GCGACATCCA TTAATGAACA AACCCTAAGT TTCTTACCAC GTCTTTTAGT TACCTTATTT
GCTTTGATGT ATTTAGGGCA TTGGCTGGTG CAAACCATGA TGGATTTTTT CCTGCAGATG
GTGAACCTTA TTCCCCAAGT GATAGGTTAG
 
Protein sequence
MSPEALIDIF REALSVIVLI VSAIILPGLF IGLIVAVFQA ATSINEQTLS FLPRLLVTLF 
ALMYLGHWLV QTMMDFFLQM VNLIPQVIG