Gene Sden_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1311 
SymbolflgJ 
ID4017305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1530309 
End bp1531412 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content46% 
IMG OID637955308 
Productflagellar rod assembly protein/muramidase FlgJ 
Protein accessionYP_562320 
Protein GI91792669 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1705] Muramidase (flagellum-specific) 
TIGRFAM ID[TIGR02541] flagellar rod assembly protein/muramidase FlgJ 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGC TGTCAAATTC ATCGCACTTT CTGGATCTAG GGGGACTGGA TTCACTCCGT 
GTTCAGGCTC AGAAAGACGA GAAGGGCACG CTTAGAGAGG CGGCTAAACA GTTCGAAGGT
ATTTTTATCC AAATGCTAAT GAAGAGCATG CGTGATGCCA ATGCCGCCTT TAAATCTGAC
AGTCCGATGA ACAGTCAAAC CACAGAGTTT TTCGAGCAGA TGCGCGATCA GCAAATGTCG
GTCGATTTAT CCAATAAAGG CATGCTGGGT CTTGCCGATC TTATGGTGCA GCAGTTGTCC
CCCGATGAAA GCCCAATAAC GCCCGCTTCA GTGCTGCGGG GGGGGCTGGA GTCTAAAGTC
GCGCCAAGCA TGTTTGTGGA TAAGGACACC CTGAACAGTA CCCCGGTGAT TTCCTTGGAT
GAGATAGCAT CATCTCATCA TGCGTTAGCG TCTCCTTTGG ATGATGTCGC CAATTCAACA
GCGCAAGTTA AACCCTTTGA GAGCGCTGCA AGTACTCAAC CTCAGTTACA GCAGGTTGAA
CAGGTGCTAA GGGGAGAAGT CTCCAGCGGC AAGTCCTTGC CACAATCAAA AAATATTGCC
GCTAATGCTG CTTTTACTGG GCCTGAACAT TTTGTTTCCA TGCTTTACCC CCATGCAGAA
AAAGCCGCCA AAGCCTTAGG TACCACCCCT GAAGTATTGA TAGCCCAATC AGCATTGGAA
ACCGGCTGGG GCAAGAAAAT GATAAGACGC AATGATGGCA CCATAAGTAA CAATTTATTC
AATATCAAAG CTGATAAGCG CTGGGGGGGT AATAAAACCA CAGTCAGCAC CTTAGAATTT
GAGAAAGGCA TAGCAGTGAA GCAAAAGGCT GATTTTCGTA TGTACGATAA CTTGGAGCAG
AGCTTTAAAG ATTTCGTGTC ATTTCTTGAA GATGGTGAGC GCTACCAAGA AGCCCGTAAA
GTGGCCAGTG AACCGGTTAA ATTTATTCAT GCACTGCAAA AAGCGGGTTA TGCCACAGAT
CCACATTATG CCAAAAAGGT GCTTCAAGTC ATGGAATCTG TAACTGACGG ACTTAAGTCT
GTGTTAGTAG GGGAGAATAA ATAA
 
Protein sequence
MEKLSNSSHF LDLGGLDSLR VQAQKDEKGT LREAAKQFEG IFIQMLMKSM RDANAAFKSD 
SPMNSQTTEF FEQMRDQQMS VDLSNKGMLG LADLMVQQLS PDESPITPAS VLRGGLESKV
APSMFVDKDT LNSTPVISLD EIASSHHALA SPLDDVANST AQVKPFESAA STQPQLQQVE
QVLRGEVSSG KSLPQSKNIA ANAAFTGPEH FVSMLYPHAE KAAKALGTTP EVLIAQSALE
TGWGKKMIRR NDGTISNNLF NIKADKRWGG NKTTVSTLEF EKGIAVKQKA DFRMYDNLEQ
SFKDFVSFLE DGERYQEARK VASEPVKFIH ALQKAGYATD PHYAKKVLQV MESVTDGLKS
VLVGENK