Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1311 |
Symbol | flgJ |
ID | 4017305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1530309 |
End bp | 1531412 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637955308 |
Product | flagellar rod assembly protein/muramidase FlgJ |
Protein accession | YP_562320 |
Protein GI | 91792669 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1705] Muramidase (flagellum-specific) |
TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGC TGTCAAATTC ATCGCACTTT CTGGATCTAG GGGGACTGGA TTCACTCCGT GTTCAGGCTC AGAAAGACGA GAAGGGCACG CTTAGAGAGG CGGCTAAACA GTTCGAAGGT ATTTTTATCC AAATGCTAAT GAAGAGCATG CGTGATGCCA ATGCCGCCTT TAAATCTGAC AGTCCGATGA ACAGTCAAAC CACAGAGTTT TTCGAGCAGA TGCGCGATCA GCAAATGTCG GTCGATTTAT CCAATAAAGG CATGCTGGGT CTTGCCGATC TTATGGTGCA GCAGTTGTCC CCCGATGAAA GCCCAATAAC GCCCGCTTCA GTGCTGCGGG GGGGGCTGGA GTCTAAAGTC GCGCCAAGCA TGTTTGTGGA TAAGGACACC CTGAACAGTA CCCCGGTGAT TTCCTTGGAT GAGATAGCAT CATCTCATCA TGCGTTAGCG TCTCCTTTGG ATGATGTCGC CAATTCAACA GCGCAAGTTA AACCCTTTGA GAGCGCTGCA AGTACTCAAC CTCAGTTACA GCAGGTTGAA CAGGTGCTAA GGGGAGAAGT CTCCAGCGGC AAGTCCTTGC CACAATCAAA AAATATTGCC GCTAATGCTG CTTTTACTGG GCCTGAACAT TTTGTTTCCA TGCTTTACCC CCATGCAGAA AAAGCCGCCA AAGCCTTAGG TACCACCCCT GAAGTATTGA TAGCCCAATC AGCATTGGAA ACCGGCTGGG GCAAGAAAAT GATAAGACGC AATGATGGCA CCATAAGTAA CAATTTATTC AATATCAAAG CTGATAAGCG CTGGGGGGGT AATAAAACCA CAGTCAGCAC CTTAGAATTT GAGAAAGGCA TAGCAGTGAA GCAAAAGGCT GATTTTCGTA TGTACGATAA CTTGGAGCAG AGCTTTAAAG ATTTCGTGTC ATTTCTTGAA GATGGTGAGC GCTACCAAGA AGCCCGTAAA GTGGCCAGTG AACCGGTTAA ATTTATTCAT GCACTGCAAA AAGCGGGTTA TGCCACAGAT CCACATTATG CCAAAAAGGT GCTTCAAGTC ATGGAATCTG TAACTGACGG ACTTAAGTCT GTGTTAGTAG GGGAGAATAA ATAA
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Protein sequence | MEKLSNSSHF LDLGGLDSLR VQAQKDEKGT LREAAKQFEG IFIQMLMKSM RDANAAFKSD SPMNSQTTEF FEQMRDQQMS VDLSNKGMLG LADLMVQQLS PDESPITPAS VLRGGLESKV APSMFVDKDT LNSTPVISLD EIASSHHALA SPLDDVANST AQVKPFESAA STQPQLQQVE QVLRGEVSSG KSLPQSKNIA ANAAFTGPEH FVSMLYPHAE KAAKALGTTP EVLIAQSALE TGWGKKMIRR NDGTISNNLF NIKADKRWGG NKTTVSTLEF EKGIAVKQKA DFRMYDNLEQ SFKDFVSFLE DGERYQEARK VASEPVKFIH ALQKAGYATD PHYAKKVLQV MESVTDGLKS VLVGENK
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