Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1285 |
Symbol | |
ID | 4017572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1504115 |
End bp | 1506589 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637955281 |
Product | hypothetical protein |
Protein accession | YP_562294 |
Protein GI | 91792643 |
COG category | [S] Function unknown |
COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC AAGAATCAAA AATCAAAAAT ATATTTGCAA TCAGCCCATT CAATGAGCAT TACTTACCAA GCGTCAATAA TAATATTTTT GAACGTATAG ATTCAGTGAC CTTGTTCAAA GATAAGTTTA AAACGGTCCA GTTACAGGAA GCTAATACTT TACATATATT TGTCGGTATG GATTCTGGTT TACTTGCCAA CTACATCCTT GAACTTCCAC AAGCACCTGA TTCTAAGTAT GTATTTGTCG AGCTGGATGA TGTTTTATCT TTACTCAGCA TAGAGATCCC AACAGAGGTT AAAGATTCAT TTTATATTTA CTCATTTGAA CAGTTTCAAC AACAGATCAA GCAGGTAGAG CTCAACCTTT TCATAGTAAA AAAACAATTC AACATACATT ACTCTTTCGC CGCATCAGCC AATTGCAATG ACAACTATGC CCAATTATGT CATAACGTCG AAAAAACGAT TGAGCGAGAA TATTTTGATA ACAGTACTGG TTTTACCCAA AAGCAATTTT TTAAAAGGCA ACTAGAGAAT CTTAGCGAAA ATTTGCAACC TGCTGAATTA TTGAGAAACA CCTTTGTAGG CAAAACCTCA ATCATTTTGG GTGGGGGTCC TTCTTTAGAT GACCATATAG AATGGATTAA AAAGAATCGA AATGATTTGA TTATTATAAG CGCATCAAGG GTAGTAGGAA AGCTTGCTAA ACTAGGGATT AGTTCAGACA TAGTCATTAC AGTCGATCCT CAAGAACACA GCTTTGAGGT TAATGAGGCT ATGATGGCAC TGAGTCAAGA TATTTTACTT GTAAGTGCTT ACCATACCTG CAGTGATATT GTTGCCCAAT GGAACGGTAA CTTACTCTAT TTAGGGATCG ATGCACCCTG GAAATGTTTA GAGATCAATT CAAATATTAC AACTGAAGGA CCAACGGTTA CAAATTGTGC AGTCCACCTT GCGGCGGAAA TGGGCTTTAA TCAAATATTA TTATGCGGTG TTGATTATTG CTATTCTCAA ACAGGTAAAT CACACACAAC TGACACTTAT GCCGCCAGTT TTGGCCCTGA CATTGGCACA ATACATGAAT GGGTTGAGAC ATATAATGGT GAGCTGGCAG AAACCCCTAT GCAACTATTT CATTCAATAG AAGCACTTGC AGAAACAACA AAAAAATGGC CACTAATTAA CTTCATCAAC CTTTCTAAAA ATGCCGCGAA AGTAAAAGGT GTCAACCATT GCCAGCCGAT TTCCATTAAC CTTGAACCTA TTCCTACTAC ACAAAGAAAC TCACTAAAAC AAAGTAATTT TAATCTATCT TCTTCAGAAA AGTCAGCTAA AATCATTAAG ATTAAAAATG AGCTAAACCA AGCAATTGAA GATATGGGGA ATGTAATTAA ATTACTCAAA AGAGCTCTGG CTTTATGTAA GAAAATTGAA AACACAGACA AGAATGAACT TATCCTATTG TCATCCAACA AGTTGAATAA CTTGGAATAT GAATTGAACA CTAAATTTAA CAATTACTGC TATCTAATAA AATTTTATGG ATTTTATGAG TTTTCACATT TTCTTTCCAC AAAAAATTCA GATTCTTGGA CACAAAAAGA TATAATAGAA CAAAACAACT CTTACTATCG TGCTTTTTTT TATATCGCCA ATGAAATTTA TGAACTCATG AACTGTGCTA TAAAACGCCT CAACGCTCGA GTTTCTGAGT ATAAAGAACC AGAAAAATTT GATGCATTCA CTCCCCAATG GATCGAAGAC AGTCACTTTG GAAGATCCAA TATATGGTTA AGAGAGAATC CAGAGAAATA TCAGTATTTA TCAGAAAAAG ATAAAGAAAA ACTCGCCCAT CTTCAACTTG AATACTTAAA TTTATTTAAC AAAAAGAAGC ATGAAGGCTC AATTATTCCT AAAGTTAAAA ATCTAGACGG CGCATTTAAA AAGCTCAGCA TCCTAATGCA ACAACAACAC ATTGTTGGCA TACAAAAAAT GGTGCAGTAT ACTGAACCAT TTAAAGAGCA AGAGTCAAAA ATATTTCATC TATACAATCT AGCCAAGAGT TATCAATTGT ATTTAGAAAA CAATCTAGAT GAGTCTTTAA AATATGTACT TTTATTAGAT GATACTGCCA GAGAAGAAAA TGAGCTCCGC CATATCATAA TGCTTGCAAT TAAACTTGAT AGTTATCATT TAGCAGAGGA ATCATTAAAA AAAATCATCC AGTACAATGA TGCGTATATA CCTCAACTTG CTAGCATACT TGCATTACAA GGTAAGCCTC AAGATGCATT AAGTACTTAC TTAGATTACT TAGACAAGTA TCCTGAAGAC GTGCCTGTAC TGCTTAAACT TGGAACTTTC CTTAAAAGTT TCAACGAAAT AGAAAGTGCA AAATCCGTTT TCAACCGTGT ACTCAACATT GAAAGCAACA ACCAAGTTGC CTTGAGATTT TTTAAAAAAT TATAA
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Protein sequence | MNKQESKIKN IFAISPFNEH YLPSVNNNIF ERIDSVTLFK DKFKTVQLQE ANTLHIFVGM DSGLLANYIL ELPQAPDSKY VFVELDDVLS LLSIEIPTEV KDSFYIYSFE QFQQQIKQVE LNLFIVKKQF NIHYSFAASA NCNDNYAQLC HNVEKTIERE YFDNSTGFTQ KQFFKRQLEN LSENLQPAEL LRNTFVGKTS IILGGGPSLD DHIEWIKKNR NDLIIISASR VVGKLAKLGI SSDIVITVDP QEHSFEVNEA MMALSQDILL VSAYHTCSDI VAQWNGNLLY LGIDAPWKCL EINSNITTEG PTVTNCAVHL AAEMGFNQIL LCGVDYCYSQ TGKSHTTDTY AASFGPDIGT IHEWVETYNG ELAETPMQLF HSIEALAETT KKWPLINFIN LSKNAAKVKG VNHCQPISIN LEPIPTTQRN SLKQSNFNLS SSEKSAKIIK IKNELNQAIE DMGNVIKLLK RALALCKKIE NTDKNELILL SSNKLNNLEY ELNTKFNNYC YLIKFYGFYE FSHFLSTKNS DSWTQKDIIE QNNSYYRAFF YIANEIYELM NCAIKRLNAR VSEYKEPEKF DAFTPQWIED SHFGRSNIWL RENPEKYQYL SEKDKEKLAH LQLEYLNLFN KKKHEGSIIP KVKNLDGAFK KLSILMQQQH IVGIQKMVQY TEPFKEQESK IFHLYNLAKS YQLYLENNLD ESLKYVLLLD DTAREENELR HIIMLAIKLD SYHLAEESLK KIIQYNDAYI PQLASILALQ GKPQDALSTY LDYLDKYPED VPVLLKLGTF LKSFNEIESA KSVFNRVLNI ESNNQVALRF FKKL
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