| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1249 |
|---|
| Symbol | |
|---|
| ID | 4017464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 1460070 |
|---|
| End bp | 1460894 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637955245 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_562258 |
|---|
| Protein GI | 91792607 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCCA TCATACTATT GGTTATCTCA GCAATCGGGG CCATATTTTG GATAACGAGC
CACAACTGGC GTGCAAGCCT TAGGCGGCGC AGCATCAAGG CTCAGGCTTT TCCAAAGGCA
TGGCGACACA TTTTAAAGTC GCGCTTTCCT TATTTCAAAG CTATGCCTGC AGACCTTCAG
CTGCAATTAA AAAAACACAT CCAAGTGTTT ATCGCCGAGA AAGAGTTTGT GGGCTGCGAT
GGCTTTATGA TTACCGATGA AGTCAAAGTG ACTATTGCCG CTCAAGCTTG CCTGTTGCTG
CTAAATCGCA ATACTGATTA CTACCCTAAG CTCAAACAAA TTTTAGTCTA CCCCAACGCC
TTTATTATGG AGCAAAATCA GACCGACTTC GCCGGCGTCG AATCGAGGCA AAGACAAGTA
TTACTGGGTC AGTCTTGGGA GCTTGGCAAG GTGGTGTTAT CTTGGAATAG CACCTTAGCA
GGCGCAGCAA ATCCTTTCGA TGGTACCAAT GTGGTTATTC ATGAATTTGC CCATCAGCTA
GATCAAGAAA ATGGCACAGC TAACGGCGCC CCCATTTTGG GGGATATCAG TGCTTATCCA
AAATGGTCAG AGGTGTTAAG TCATGAATTC AATCAACTGC AATATGCCGC CCAACATCAA
CAGCCTTCAT TGTTTGACTA TTATGGCGCC ACTAATCCTG GTGAATTCTT TGCCGTCATC
AGTGAGGTGT TTTTTGAGCG ACCAATCGAT TTCTCACGCG CGCACCCCAA GCTCTATCAA
GAGTTGAGCC AATTTTATCG ACTCGATCCC ATTCACTGGC AATAA
|
|---|
| Protein sequence | MLAIILLVIS AIGAIFWITS HNWRASLRRR SIKAQAFPKA WRHILKSRFP YFKAMPADLQ
LQLKKHIQVF IAEKEFVGCD GFMITDEVKV TIAAQACLLL LNRNTDYYPK LKQILVYPNA
FIMEQNQTDF AGVESRQRQV LLGQSWELGK VVLSWNSTLA GAANPFDGTN VVIHEFAHQL
DQENGTANGA PILGDISAYP KWSEVLSHEF NQLQYAAQHQ QPSLFDYYGA TNPGEFFAVI
SEVFFERPID FSRAHPKLYQ ELSQFYRLDP IHWQ
|
|---|
| |