Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1229 |
Symbol | |
ID | 4017278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1432247 |
End bp | 1432954 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637955225 |
Product | regulatory protein, TetR |
Protein accession | YP_562238 |
Protein GI | 91792587 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCACC TCTTTCTTGA ATGTGCATTC AAGATATTCT TATTTGAACA TTCATTCAAG TATTTTTTGA ATAATTTTTC AAAGCTGGGT AGACTCATCA TACCAAGCCT TAAGAAAACG CAAATTATGA GAAATGCCGA GTTCGACCGC AAAGCCGTAT TGTGTGCCGC CATGAGTGTG TTCACCGCCA AAGGCTATGC GAAAACCAGC ATGCAAGATC TCACCAAAGC CACAGGACTG CACCCGGGCT CCATCTATTG TGCATTTGAA AATAAGAAAG GCTTATTGAT TGCGGCCATA GGTCAGTATC AGGATGAACG TCATCAGCAG TTTGTCCGCC TATTTGACAA TGACGCCCCA TGTTTAAGTA ATTTAAGCAA TTACTTAACT GAAATCGTCG ATGAGTGTTT ATCTCAAGAT ATGAGCAAGG CCTGTCTGCT GACAAAAACC TTGAATGAAG TGGGTTCGCA AGATGAAGAG ATTAAAACGC TGATCACCGC AAATTTAACC GCTTGGCAAG CAGCGCTCAC GGCAGTGTTT AGCTTAGCCC AAAAAAATAA CGAAATTGAC AGCCAAGCCA ATAGCCAAGA ATTAGCGCAA TATTTGATGA TGGGTATTTA TGGGCTGAGA ACCTTTGCTC ACACTCACAA GGATGGCCAA CAACTAGCTC AACTGGCAAA GAAACTGTTA GCCGATGTCA GTCGCTAA
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Protein sequence | MWHLFLECAF KIFLFEHSFK YFLNNFSKLG RLIIPSLKKT QIMRNAEFDR KAVLCAAMSV FTAKGYAKTS MQDLTKATGL HPGSIYCAFE NKKGLLIAAI GQYQDERHQQ FVRLFDNDAP CLSNLSNYLT EIVDECLSQD MSKACLLTKT LNEVGSQDEE IKTLITANLT AWQAALTAVF SLAQKNNEID SQANSQELAQ YLMMGIYGLR TFAHTHKDGQ QLAQLAKKLL ADVSR
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