| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1204 |
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| Symbol | |
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| ID | 4017727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1399796 |
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| End bp | 1400779 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955194 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_562213 |
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| Protein GI | 91792562 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000153411 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAGAA CAACTAACAC TGCAGTAGCA GAAAAGCTTG TAGATTTATC CACAAAAACC
AAAAAAGAAG GTGCGCAAAA GAGCGACAAG GCCGTTGATC TCGTGCAGCA ACTCGAAATT
GAACAACAAG TTCAAGAAGA CCTCCAAAAA AATCTTGACG CCACTCAGTT GTATTTAGGC
GAAATAGGAT TTTCCCCTTT GCTTAGTGCT GAAGAAGAAG TGTTCTTCTC ACGTAAAGCC
CTCAAAGGTT GCGAGAAATC TCGTAATCGC ATGATAGAAA GTAACCTAAG ACTCGTGGTG
AAAATTGCCC GTCGCTACAA TAATCGTGGT TTGGCCCTGT TAGATCTTAT CGAAGAAGGT
AATTTGGGCC TGATAAGAGC GGTGGAAAAG TTTGACCCAG AAAGAGGTTT CCGTTTTTCT
ACTTATGCCA CTTGGTGGAT CAGGCAGACC ATAGAACGTG CGATTATGAA TCAAACTCGC
ACCATACGTT TGCCAATCCA TGTGGTTAAA GAACTTAACG TCTACCTACG TACTGCAAGA
CAGCTAGCAC AGAAGCTAGA TCACGAGCCA ACGGCAGAGG AAATTGCCGC CAAGCTTGAT
GTCTCCACCA GTGACGTAAG CCGGATGTTA AAGCTTAATG AGAAAATTAC CTCAGTAGAC
ACCCCACTGG GTGGCGATAA CGAAAAAGCA CTATTAGATG TGATTGCCGA CGACGATAGC
GTAGGCCCTG ATTATCAAGT GCAAGATGAA GACTTATCCA ACTCTATTGT TGGCTGGTTA
AACGAACTCA ACACCAAGCA AAGAGAAGTA CTAGCACGAC GCTTTGGTTT ATTGGGTTAC
GAGCCATCGA CACTGGAAAA TGTTGGCGCA GAGATAGGTT TGACTCGAGA ACGTGTTCGT
CAAATTCAAG TGGAAGCGTT AAAGCGTTTA AAAGACTTGT TAAGCAGTCA AGGTCTGTCA
GTAGAGGCTC TCTTTAGAGA CTAA
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| Protein sequence | MSRTTNTAVA EKLVDLSTKT KKEGAQKSDK AVDLVQQLEI EQQVQEDLQK NLDATQLYLG
EIGFSPLLSA EEEVFFSRKA LKGCEKSRNR MIESNLRLVV KIARRYNNRG LALLDLIEEG
NLGLIRAVEK FDPERGFRFS TYATWWIRQT IERAIMNQTR TIRLPIHVVK ELNVYLRTAR
QLAQKLDHEP TAEEIAAKLD VSTSDVSRML KLNEKITSVD TPLGGDNEKA LLDVIADDDS
VGPDYQVQDE DLSNSIVGWL NELNTKQREV LARRFGLLGY EPSTLENVGA EIGLTRERVR
QIQVEALKRL KDLLSSQGLS VEALFRD
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