| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1202 |
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| Symbol | |
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| ID | 4017725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1398005 |
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| End bp | 1398640 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955192 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_562211 |
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| Protein GI | 91792560 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00210603 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAG CAGCATCAAC ACTGGCATTG AATTTAGCCA GAAAACTCTA TGAAACTGGC
ATTCGCAGTC AGTCAGTGTT GAGTGCTGTG GCCAATACCC CAAGAGAGTT ATTTCTCGAT
AACGCTTTGG CCCATAAGGC GTATGAAAAT ACCGCCTTAC CCATAGGCCA AGGACAGACT
ATCTCTCAAC CCTATATTGT GGCGCGTATG ACAGAGTTAT TACTGCAAAC TCAGCCCAAT
AAAGTGTTGG AAATAGGGAC AGGGTCAGGC TATCAAGCGG CCATCTTGGC GCAGTTGGTA
CCGCAGTTAT GCACCATAGA ACGAATAAAA GCATTACAAA TTCAAGCAAG ACAAAGGCTT
AAACGTTTAG ACTTGCATAA TGTGTCGTTT AAATACGGTG ATGGCTGGCA AGGTTGGCAT
AATAAGGGGC CGTTCGATGG TATTTTAGTC ACAGCGGCGG CGTCCAAAGT CCCCGAAGCC
TTACTGGCTC AACTTAGTGA TGGCGGTGTG TTACTCATAC CTGTGGGGGA AGATGCGCAG
CAATTGCTTA AAATTACCCG TACCGGACAG AGCTTTGAGT CACAAATCAT AGAAGCGGTT
AAGTTTGTGC CGCTCATTAA TGGTGAACTT GCCTAG
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| Protein sequence | MTAAASTLAL NLARKLYETG IRSQSVLSAV ANTPRELFLD NALAHKAYEN TALPIGQGQT
ISQPYIVARM TELLLQTQPN KVLEIGTGSG YQAAILAQLV PQLCTIERIK ALQIQARQRL
KRLDLHNVSF KYGDGWQGWH NKGPFDGILV TAAASKVPEA LLAQLSDGGV LLIPVGEDAQ
QLLKITRTGQ SFESQIIEAV KFVPLINGEL A
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