| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1183 |
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| Symbol | |
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| ID | 4017668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1373084 |
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| End bp | 1374217 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955173 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_562192 |
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| Protein GI | 91792541 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000246856 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAGA GAGATTATTA CGAAGTATTA GGTGTGGGTC GCGATTCGAG TGAGCGTGAC
ATCAAGAAAG CCTATAAGCG CTTAGCCATG AAATTTCACC CGGACAGAAA CCCAGGTGAT
AAAGCGGCTG AAGCCAGCTT TAAAGAAATC AAAGAAGCCT ATGAAATATT GACCGATGGC
GATAAGAAAG CCGCTTATGA TCAGTTTGGT CATGCAGGCG TCGATCCTAA CCGTGGCGGT
GGTGGTCATG GTGGCGGTGA TTTCGGTGAC ATCTTTGGTG ATGTGTTCGG TGATATTTTT
GGTGGTGGTC GCCGCGGTGG TCAACGTCAA GCGGCTCGTG GTAGCGACTT ACGTTACAAC
TTAGAGTTAT CTTTGGAAGA GGCCGTTCGC GGACTCACCA AAGAGCTGCG CATTCCAACC
TTAGCGGCCT GTGATTTATG TGATGGTAGT GGCGCGAAAA AGGGCACCTC GGCTTCAAGC
TGTGGTACCT GTCATGGTCA AGGCCAAGTG CAGATGCGCC AGGGTTTCTT CGCCGTGCAG
CAAGCCTGTC CGACCTGTCA TGGCCGCGGT AAGATCATTA AAGATCCTTG TGGCAAGTGT
TACGGTGAAG GCCGGGTCGA GAAGAGCAAA ACTTTATCGG TTAAAATCCC AGCTGGCGTT
GATACCGGTG ATCGAATTCG TTTAGCCGGT GAAGGTGAAG CGGGAGAATT TGGTGCCCCA
GCAGGTGATT TGTACGTCCA AGTGAGCGTG CGCGAGCACG GAATTTTCAC TCGCGATGGC
AATAACCTCT ACTGTGAAGT GCCGATTTCA TTCAGTAAAG CCGCCTTAGG TGGTGAGATT
GAAGTGCCGA CATTAGACGG CAAAGTCAGC CTTAAGATCC CAACTGAAAC CCAAACTGGT
CGCATGTTCC GTTTACGTGG CAAAGGGGTT AAGTCGGTTC GCAGTCATGC TATCGGCGAT
TTGCTTTGTA AAGTCGTGAT GGAAACCCCG GTTAACTTGA GCGAGCAGCA AAAAGAGCTA
CTGCGCGAAT TTGAAGCCAG CCTCACAGGG GCGGGAGCCT CTAAGAAACA CAGCCCTAAG
GCTGAAGGTT TCTTCGATGG GGTGAAGAAG TTCTTTCAAG ACTTAAATAG CTAA
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| Protein sequence | MSKRDYYEVL GVGRDSSERD IKKAYKRLAM KFHPDRNPGD KAAEASFKEI KEAYEILTDG
DKKAAYDQFG HAGVDPNRGG GGHGGGDFGD IFGDVFGDIF GGGRRGGQRQ AARGSDLRYN
LELSLEEAVR GLTKELRIPT LAACDLCDGS GAKKGTSASS CGTCHGQGQV QMRQGFFAVQ
QACPTCHGRG KIIKDPCGKC YGEGRVEKSK TLSVKIPAGV DTGDRIRLAG EGEAGEFGAP
AGDLYVQVSV REHGIFTRDG NNLYCEVPIS FSKAALGGEI EVPTLDGKVS LKIPTETQTG
RMFRLRGKGV KSVRSHAIGD LLCKVVMETP VNLSEQQKEL LREFEASLTG AGASKKHSPK
AEGFFDGVKK FFQDLNS
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