| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1142 |
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| Symbol | glyA |
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| ID | 4017315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1313312 |
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| End bp | 1314565 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955132 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_562151 |
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| Protein GI | 91792500 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.510367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAACA AAGCTATGAA TATCGCGGAT TATGATCCAC AACTATTTAA AGCCATTGAA
GACGAAACCC GTCGTCAAGA AGAGCACATA GAGTTAATTG CATCAGAAAA CTACACCAGT
CCTCGCGTCA TGGAAGCACA AGGTTCACAG CTTACCAATA AGTATGCAGA AGGTTACCCA
GGCAAGCGTT ATTACGGCGG TTGTGAATAC GTCGATGTGG TTGAAACCTT GGCCATCGAA
CGTGCTAAAG AATTGTTTGG CGCGACTTAT GCCAACGTTC AGCCTCATTC AGGATCGCAA
GCCAACAGCG CTGTGTACAT GGCGCTACTT AAGCCCGGTG ATACTGTGCT TGGGATGAAT
TTGGCTCATG GTGGTCACTT AACGCACGGT TCACCAGTGA ACTTTTCTGG CAAGCTGTAT
AACATCATTC CTTACGGCAT CGATGAAGCG GGCAAGATAG ATTACGTTGA GATGGAGCGT
TTAGCCGTTG AGCATAAGCC TAAGATGATG ATCGGTGGCT TCTCTGCCTT TTCTGGTATC
GTTGATTGGG CAAAAATGCG TGAAATCGCA GACAAAATTG GCGCTTACTT ATTTGTTGAT
ATGGCCCACG TTGCAGGTTT AATTGCCGCA GGCGTGTATC CAAACCCTGT GCCCCATGCC
CACGTGGTGA CATCCACCAC ACATAAGACC TTAGCAGGCC CTCGTGGCGG GTTAATCTTA
TCGGCAGCAG ACGATGAAGA CTTGTACAAG AAGCTAAATT CGGCCGTGTT CCCTGGCGGA
CAGGGCGGCC CATTGATGCA TGTTATCGCG GGTAAAGCGG TGGCCTTTAA GGAAGCCTTA
GAGCCTGAGT TTAAAACCTA TCAGCAGCAA GTGGTGAAAA ACGCTAAGGC TATGGTTGAA
GTGTTTATCG AGCGCGGTTA TAAAATCGTC TCAGGCGGCA CAGATAACCA CCTGATGCTG
GTTGACTTAA TTGGCCGTGA TCTTACCGGT AAAGAAGCGG ATGCCGCCTT AGGTAGCGCT
AACATTACCG TGAATAAAAA CTCGGTGCCA AACGATCCAC GTTCACCTTT TGTGACATCT
GGTGTGCGTA TCGGTACTCC GGCTATTACC CGTCGTGGTT TTAAAGAAGC CGAAGCCAAA
GCCTTGACAA CTTGGGTGTG TGACATTCTC GATGACGCTA ATAATCCAGC GGTTATTGAG
CGGGTCAAGG GTGAAGTGTT AGCCCTGTGT GCCAAGTATC CAGTATACGC TTAA
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| Protein sequence | MLNKAMNIAD YDPQLFKAIE DETRRQEEHI ELIASENYTS PRVMEAQGSQ LTNKYAEGYP
GKRYYGGCEY VDVVETLAIE RAKELFGATY ANVQPHSGSQ ANSAVYMALL KPGDTVLGMN
LAHGGHLTHG SPVNFSGKLY NIIPYGIDEA GKIDYVEMER LAVEHKPKMM IGGFSAFSGI
VDWAKMREIA DKIGAYLFVD MAHVAGLIAA GVYPNPVPHA HVVTSTTHKT LAGPRGGLIL
SAADDEDLYK KLNSAVFPGG QGGPLMHVIA GKAVAFKEAL EPEFKTYQQQ VVKNAKAMVE
VFIERGYKIV SGGTDNHLML VDLIGRDLTG KEADAALGSA NITVNKNSVP NDPRSPFVTS
GVRIGTPAIT RRGFKEAEAK ALTTWVCDIL DDANNPAVIE RVKGEVLALC AKYPVYA
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