Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1127 |
Symbol | |
ID | 4017409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1294479 |
End bp | 1295351 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637955118 |
Product | transposase, IS4 |
Protein accession | YP_562137 |
Protein GI | 91792486 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5433] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATATCG AATCATTCAA GCAGCATTTT AGTGCCATTG ACGACCATCG CCAAAGTGCA AAAGTTACCT ATCCCCTGTT CGATGTACTG TTCGGTTCGC TGTGCGCTGT TATTGCGAGT TCCAATGGCT GGTTCGAGAT CCGAGAATAC ATTCTTGGTC ACCATTCTTG GTTCAAAAAA CAAAAAATGT TCATCGATGG GATCCCTGCT GACGATACCA TTGCTAGGAT AGTTTCTATG ATTGAGCCAG ATAGCTTTAA TGCGTGCTTT CTCGCATGGA TGAAGTCGGT TCATCAGCTG ACTAATGGAG AAGTCATTGC GATTGATGGA AAGACGCTAC GTGGGTCATA TAATCGCGAT GATCGAAGCA GTACTATTCA CATGATAAGC GCTTATGCCT CAGCGAATAA GTTGGTACTT GGTCAATTAA AAGCAGAGCA AAAAAGTAAT GAAATCACAG CCATTCCAAC CCTATTAAAA ATGCTAGACC TGCGCGGAGC GCTAGTGACA ATCGATGCTA TGGGCTGTCA AACGGCTATT GCTACAACGA TTATCGACAA AGGTGGTGAC TACCTATTGG CGGTAAAAAA CAATCAAGGC AACTTAGCTA AAGCAATAAA TAAAGCCTTT AGTTCGCATC GTTCGGCTGG CTTAAGTGAT GACCATGTCA ATATAGAAAA AAGCCATGGT CGTATAGAAA ATCGAGCCTG TTTTGTGTTG AGCTCAGCAG AGCTTGACGG TGATTTTACA CATTGGGAAG CACTCAAATC CATCGTTATG GTTGAAAGCT TTAGGGCTGT TAAAGGTAAG ACGGCGAGCC TTGAATATCG TTACTATATC AGTTCGAAAG TGTTATCAGC AGAGCAGCCT TAA
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Protein sequence | MYIESFKQHF SAIDDHRQSA KVTYPLFDVL FGSLCAVIAS SNGWFEIREY ILGHHSWFKK QKMFIDGIPA DDTIARIVSM IEPDSFNACF LAWMKSVHQL TNGEVIAIDG KTLRGSYNRD DRSSTIHMIS AYASANKLVL GQLKAEQKSN EITAIPTLLK MLDLRGALVT IDAMGCQTAI ATTIIDKGGD YLLAVKNNQG NLAKAINKAF SSHRSAGLSD DHVNIEKSHG RIENRACFVL SSAELDGDFT HWEALKSIVM VESFRAVKGK TASLEYRYYI SSKVLSAEQP
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