| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1118 |
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| Symbol | cobS |
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| ID | 4017661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1286601 |
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| End bp | 1287389 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955110 |
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| Product | cobalamin synthase |
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| Protein accession | YP_562129 |
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| Protein GI | 91792478 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGAATG AATATAACTG GCTAAGACAG TTGAATTTAT TTTTTGTTGC CACAGGTTTT
TTTACTCGAC TTCCCACGCC TTCTTGGGTC ATCGCGGATG ATAATGAGCT TAAAAAATCC
AGCCGTTACT TTGGACTCGT CGGGCTCTTG ATTGGTCTTA TTTGTGCGCT TGTGTATTGG
TTCACCCAAC AATGGCTGCC TACCAGTGTC GCAGTGCTCT TAGCCATGGT GGCTGGGGTA
TTGGTCACTG GCGGTTTCCA CGAAGATGGC TTAGCCGATA CCGCTGATGG TTTCCTTGGT
GGCAAGACGT TTGAAGATAA ACTTCGAATA ATGAAAGACA ACCACCTTGG CAGCTATGGT
GCCATAGTGT TGGCGTTGAT TTTATTGCTC AGGTGGCAAC TGCTGGTGGA ATTGGCGTTA
TTTAGTCCTT GGGCGGCGAT TACTGGTTTT ATTGTGGCTC ACACTTTGAG CCGAGTGTTG
GCGGCAAGCC TGATTTTTAG CGTGAAATAC GTCACCGATC TTGAACTTGA AGAAGGTAAG
CGATTAAGCC ATGACCAATC ATTGAATGAT CTATTTATTC TGCTGGCCAG TGGTATTTTT
GTGCTGTTTT GGCTCAATGG CTTAGCGGCC TTCGTATTGT TTATTTCCTT GTGGGCGCTG
CGTTTCTGTC TGTGCAAATA TTTTAGAAGT CAGATTGGTG GTTACACTGG AGATACCTTA
GATGCGGCCC AGCAAGTGAG TGAAATCATG TGTTACTTGA TTATTCTTGC CGTTGGCTTA
AGTGCCTAA
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| Protein sequence | MSNEYNWLRQ LNLFFVATGF FTRLPTPSWV IADDNELKKS SRYFGLVGLL IGLICALVYW
FTQQWLPTSV AVLLAMVAGV LVTGGFHEDG LADTADGFLG GKTFEDKLRI MKDNHLGSYG
AIVLALILLL RWQLLVELAL FSPWAAITGF IVAHTLSRVL AASLIFSVKY VTDLELEEGK
RLSHDQSLND LFILLASGIF VLFWLNGLAA FVLFISLWAL RFCLCKYFRS QIGGYTGDTL
DAAQQVSEIM CYLIILAVGL SA
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