Gene Sden_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1080 
Symbol 
ID4016796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp1235643 
End bp1236227 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content47% 
IMG OID637955072 
Producthypothetical protein 
Protein accessionYP_562091 
Protein GI91792440 
COG category[S] Function unknown 
COG ID[COG3758] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.62386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGATCA TTCCCCCCAA TGACTTTAAA CGTCTGCCTT GGAAGAATGG CAAAGGCGAG 
ACCATAGAAC TTGCCATCAA TGAGGGCGGT ACAATGGCTG ACTTTGACTG GCGCATCAGT 
ATGGCAAAGG TCACCGAAGA TGGGCCTTTC TCGGACTTTA GTGGTTACCA ACGTCAGCTA 
TTGCTGCTTG AAGGTGTGGG GATCACCCTC AAGCACCAAA ACCATGATGG TCGGCATCAA 
TACCAGACAT TAGCCACGCC GCTGGCCGTC GCCAACTTTG ATGGCGGCCT TATGACCTCA 
GGTGTGTTAA TTAATGGCCC TATTAGTGAT TTTAACTTGA TAGTAAAAGC CGCTAAATAT 
CAGACTGACG TTCACGTATT GCAAGCCAGT ACACTTACAC TGCCTTTATC TCAGCTGCTA 
TTTGCCTATG CTGTCACCGG CAGTTGTGAA GTGACATTCA GCAATAACAC CATAACACTC 
CCCCAAGGGT ATTTAGTCAG GCTTGCAGCC GACGATTTAG CGTCCAGTAG TCCTGTTAAT 
TTCAGCGGTG AACGAGTCAT TATTATGAGC CTAGCCTTAT TATAA
 
Protein sequence
MQIIPPNDFK RLPWKNGKGE TIELAINEGG TMADFDWRIS MAKVTEDGPF SDFSGYQRQL 
LLLEGVGITL KHQNHDGRHQ YQTLATPLAV ANFDGGLMTS GVLINGPISD FNLIVKAAKY 
QTDVHVLQAS TLTLPLSQLL FAYAVTGSCE VTFSNNTITL PQGYLVRLAA DDLASSSPVN 
FSGERVIIMS LALL