| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1070 |
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| Symbol | |
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| ID | 4016786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1222643 |
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| End bp | 1224286 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955062 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_562081 |
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| Protein GI | 91792430 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATATC GCTTGCCCTT GGCGCAGATG CAACACAATG TTGCACAGCA TCCAGATAAA
ACTTGGTTGC ATCAGCCTGT CAATAGAGTT TGGCACACGT ATACTTGGGG CGAAGCCGAT
GAACAGGCAA GAAAAATGGC CCAAGCCTTA CTGTCAAATG GCTTGAGCCG CGGAGATAAA
ATCGCTGTTA TAGGCAAAAA CTCTGCCGAA TGGTTTATTG CTGATCTCGC CATCATGATG
GCAGGATTGA TAAGTGTGCC CATCTACCCC ACCGCTGGCG CCGATAACAT TAAGTACGTG
TTGGAGCACA GTGGCGCTAA AGCGGTTTTT ATCGGTAAAC TGGATAAGAC AGACGCCTTA
GCTGAGGCAT TACCGAGCGA TATGCTCAGC ATCGCCTTCC CGTATCCCAC ACTCCCCTGT
AAAGCCCAAT GGAATGATTG GTTGCAAGAA TACCAGCCGC TGCAAACACT TCATCAACCA
GAAGCCGATG AGATTTTCTC TCTCATCTAC ACCTCAGGCA GTACAGGTTT AGCCAAAGGT
GTGGTGGTGA CACAAAAAAA CGTGGCCTCC TCTGCTATGA GCGCCGCCAA ACTGCTGGTC
TCCAATGACA ATAGTCGCCT TATGTCTTAC CTGCCATTGG CCCATATCAC AGAGCGCTGC
GTCGTTGAAT TACCCTCAAT CTATAGCCCA TCGGATATCT TCTTTACTGA GTCCCTTGAG
ACCTTTATCC ATGATGTTCG CCATGCTAAG CCCACAAGTT TTGTGTCTGT ACCTAGGCTG
TGGACTAAGT TTCAGTCGCA GATTTTGGCC AAGCTGCCCA ACAAAAAGTT GCAGTTTTTG
CTTAACATTC CCTTTATTGG AAAACTGGTG GCGAAAAAAA TCCGCACTCA ACTTGGCCTC
AGCCAAGCCA GCTTATTTGG CTCAGGCAGT GCGCCTATCT CCCCCGAAGT CTTGCTCTGG
TTCCATGGCG TTGGGATAAG CATAGGTGAA GGCTGGGGAA TGACAGAAAC CTCGGGCCTG
TCGTGCTGTA ATATTCCGTT CAATTTAAGT CATGTAGGCA CCATAGGCAC ACCTCAGCCT
TGCGTAGAGA TGAAGCTGTC AGAGGAAGGC GAAGTGCTGA TCCGCGGTGA TGCCGTATTC
TCTGAGTATT ACAACAACCC ACAAGCCACC CAGGAGGCGT TTGCCGATGG CTGGTTTAAA
ACTGGTGACA AGGGCAAAAT CAATGCCGAT GGTGCTTGGT CCATTATTGG TCGAGTAAAG
GAGCAATTTA AAACCAGCAA AGGTAAATAT GTGGCCCCTG TTCCCATAGA GTCGAGCCTT
GGGCGTAATA CCGATATCGA ACAAGTCTGT GTCATGGGAA TTGGCCGTAA ACAGCCTATC
GCACTGGTGG TTCTCGGTGA AGGTGCAAGC AAGAACCGCG CTGAAGTCAC TCAAGAATTG
CAAAAAACCT TGGATGCGGT AAACCGTGAA CTCGAGTCTC ATCAACGGCT TGAACATATC
ATAGTGGTTA AAGAGCCTTG GGCTATTGAA AACGAACTGC TCACGCCGAC GCTCAAACTG
AAGCGAGATA AATTGGAGAA CCACTACGGC CATTTCCTAA CCGCGGCCTT GCAAACTAGC
ATAGTCTGGG AAGACACGAT GTAA
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| Protein sequence | MEYRLPLAQM QHNVAQHPDK TWLHQPVNRV WHTYTWGEAD EQARKMAQAL LSNGLSRGDK
IAVIGKNSAE WFIADLAIMM AGLISVPIYP TAGADNIKYV LEHSGAKAVF IGKLDKTDAL
AEALPSDMLS IAFPYPTLPC KAQWNDWLQE YQPLQTLHQP EADEIFSLIY TSGSTGLAKG
VVVTQKNVAS SAMSAAKLLV SNDNSRLMSY LPLAHITERC VVELPSIYSP SDIFFTESLE
TFIHDVRHAK PTSFVSVPRL WTKFQSQILA KLPNKKLQFL LNIPFIGKLV AKKIRTQLGL
SQASLFGSGS APISPEVLLW FHGVGISIGE GWGMTETSGL SCCNIPFNLS HVGTIGTPQP
CVEMKLSEEG EVLIRGDAVF SEYYNNPQAT QEAFADGWFK TGDKGKINAD GAWSIIGRVK
EQFKTSKGKY VAPVPIESSL GRNTDIEQVC VMGIGRKQPI ALVVLGEGAS KNRAEVTQEL
QKTLDAVNRE LESHQRLEHI IVVKEPWAIE NELLTPTLKL KRDKLENHYG HFLTAALQTS
IVWEDTM
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