| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1052 |
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| Symbol | |
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| ID | 4017559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1203309 |
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| End bp | 1204220 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955044 |
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| Product | amino acid ABC transporter |
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| Protein accession | YP_562063 |
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| Protein GI | 91792412 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTCA GCGCATCGAT ACACGGCAAT TTGCTCAGGG TATTATCTCA AGCCTTAGCC
ATAACGGGCT TATTTATGGG TCAAGGTGCC CTATCTGCTC GACCTTTATT CGCGGTTCTT
GCTTGTTTAA GTTTGATCAC CTTTAGTGGC ACTAGCCTTG CTGAGCATGC CAAGTTAATT
GATGTTGAAG TGTTAACCCA GCAATTATCC CATGAGCACG GCACCCAATC ACAAGTGAAC
AGCATCATCT TAGCCGCAGA AGACAGCTGG CCCCCTTTTG CCGATCAGTT TGGCAAGGGT
ATTTCTCATC AACTGGTCAA GTCTGCCTTT GCTGAAGTGG GCATCCGCGT GGAAACCTTA
GTTGTGCCTT ACTCTCGTGG CCTTCGAATG GCTGAACGCG GCAATGTGGA CGGTGTCTTT
AATGTCACCA GAGAAGTTAG CACTCAAGAT AAATTCATCT TCGGTCAGCA ACCATTGTTT
CAGGCCTCCG CCTCTTTCTA TCAGCATAAA TCGCACCCCA TCAGCGCCAA AAGTAAATAT
GACTTAGCCC CGAAGGCTGT GATTGGCGTC ATCAAAGGCT ACGAATACGG CGATGAATTT
CCCCAATTGG TGAAGCAAAA AGACTGGGTA CTATTTATTG CCAATAACCA GATGCAATTG
ATCAACATGT TGTTAGTCAA CCGAATTGAT TTAGCCGTGA TGTTTGATGC CGTGGCCAAG
GAGCAGCTCA CTCAGATGGG CGTTAATGAA GAAATCCAGC CGATATTTAA CAATCACCAG
AGTGACATTT TTGTCGCGTT TTCCAAGCAA CAACCAAATT CATCACTGTT AGCAAAAAAA
CTCGATGAAG GCTTAATCAA GCTGAAAAGT CAGGGACAAT ACGCTAAACT CCTGCTTCCT
TTGAAAAATT GA
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| Protein sequence | MMFSASIHGN LLRVLSQALA ITGLFMGQGA LSARPLFAVL ACLSLITFSG TSLAEHAKLI
DVEVLTQQLS HEHGTQSQVN SIILAAEDSW PPFADQFGKG ISHQLVKSAF AEVGIRVETL
VVPYSRGLRM AERGNVDGVF NVTREVSTQD KFIFGQQPLF QASASFYQHK SHPISAKSKY
DLAPKAVIGV IKGYEYGDEF PQLVKQKDWV LFIANNQMQL INMLLVNRID LAVMFDAVAK
EQLTQMGVNE EIQPIFNNHQ SDIFVAFSKQ QPNSSLLAKK LDEGLIKLKS QGQYAKLLLP
LKN
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