Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1025 |
Symbol | |
ID | 4017070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1172874 |
End bp | 1173650 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637955017 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_562036 |
Protein GI | 91792385 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0327864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGTG ATTTAAAAAA AGCAGCCCAA CTTGGCATTC AGTTAATGGA CTTAACGACG TTAAATGATG ATGACACAGA TCAAAAGGTC ATCGATTTAT GCCACAAGGC CGTCACCGCT GCGGGACACA CTGCCGCTAT TTGTATCTAC CCTCGTTTTA TCCCTATTGC GCGCAAGACC CTAAACGAGC TTGACGCCGA AGACATCAAG ATTGCGACTG TGACTAACTT CCCTCATGGC AATGACGATA TTGCTATTGC CGTGTTAGAG ACTCGTGCTG CCGTTGCCTA TGGCGCCGAT GAAGTTGATG TGGTGTTTCC TTATCGCGCC TTGATGGATG GTGATGAAAC CACAGGTTTT GAGCTAGTCA AAGCTTGTAA AGAAGCCTGT GGCGATGAAG CCATATTAAA AGTGATTATC GAATCTGGCG AGCTTAAAAA TCCTGCGCTT ATTCGCAAGG CTTCTGAACT TGCCATCGAT GCTGGCGCCG ATTTTATCAA GACTTCTACC GGTAAAGTGC CAGTAAACGC GACCTTAGAA GCCGCTGAAA TCATGCTGAC TGTCATCAAA GAGAAAAACA CTAAGGTTGG TTTTAAGCCT GCTGGCGGCG TACGTGATGC GGCGCAAACG GCTGAGTTCT TAGCCCTTGC CGAACGTATT TTAGGCGCCG ATTGGGCGAC ACCAAGCACC TTCCGTTTTG GCGCTTCGAG CTTACTTAAC AGCCTATTGC ATACCTTAGA ATTAGCAGAA GCTGCCAAAC CAAACCAAGG TTACTAA
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Protein sequence | MMSDLKKAAQ LGIQLMDLTT LNDDDTDQKV IDLCHKAVTA AGHTAAICIY PRFIPIARKT LNELDAEDIK IATVTNFPHG NDDIAIAVLE TRAAVAYGAD EVDVVFPYRA LMDGDETTGF ELVKACKEAC GDEAILKVII ESGELKNPAL IRKASELAID AGADFIKTST GKVPVNATLE AAEIMLTVIK EKNTKVGFKP AGGVRDAAQT AEFLALAERI LGADWATPST FRFGASSLLN SLLHTLELAE AAKPNQGY
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