| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1024 |
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| Symbol | |
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| ID | 4017069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1171613 |
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| End bp | 1172500 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955016 |
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| Product | nucleoside-specific channel-forming protein, Tsx |
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| Protein accession | YP_562035 |
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| Protein GI | 91792384 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000282973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATG TTAAAATGTT AGCGCTAGCT ACTACAACGG TAGCTGCAAT GTCTGGCACT
GCTTTTGCTG CTGACCGTGG TACTGATATC CACGCTGGCG ATTACAAGTG GATGCAGTTC
AATGCTATGT ATTCAGTTGA TGAGCATCCA ATTGCTGATG GCGTAGATGC AAAGCACGAC
TACCTAGAAA TGGAATTTGG CGGCCGTTCA GGTGTTGTTG ACTTATACGG TTATGTTGAT
GTGTTCAACT TAGCTAAAGC TGATTCTGGT GATAAAACTG GTAACGCAAG CAAGATGTTC
ATGAAGTTTG CACCACGTTT CTCTATCGAT GCTATCACAG GTAAAGATTT GTCTTTCGGC
CCTGTTAAAG AAGTTTACTT CTCTACGCTA TACAACTGGG GCGGCGGTGC AGCAAACAAA
GACGGTTCAG GTGACGTAAA TATGTCATTT TGGGGTGTGG GTGCTGACGT TGAAGTGCCT
TGGTTAGGTA AGACTGGTAT GAACTTATAC GGTACTTACG ACATCAATAC TAAAGAGTGG
AACGGTTACC AGTTCTCTGC TAACTGGTTC AAGCCTTTCA AATTCTTCGA CAACGGTAGC
TTCTTATCGT TCCAAGGTTA TATCGATTGG CAGTTCGCTA TGGATGAGAA AGCTTCAGGC
ACCAACATCG ATGGTAAGTA TAACCTTACT GATAACGGTG GCGCATTTTT CTTAGGCCTA
TACTGGCACT CAGATCGTTT CGCGCTAGGT TATGGTGCTA AGTACTACAA CAATGTTTAT
GGTCTAAATG ACCGTGCGTT TGCTGGTGCA CCTTGGGCTG AGCCAGATTG GACTGGTTTA
AACACCACCG GTTGGGGTCA CTACTTAACA GCAACTTACA AGTTCTAA
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| Protein sequence | MKNVKMLALA TTTVAAMSGT AFAADRGTDI HAGDYKWMQF NAMYSVDEHP IADGVDAKHD
YLEMEFGGRS GVVDLYGYVD VFNLAKADSG DKTGNASKMF MKFAPRFSID AITGKDLSFG
PVKEVYFSTL YNWGGGAANK DGSGDVNMSF WGVGADVEVP WLGKTGMNLY GTYDINTKEW
NGYQFSANWF KPFKFFDNGS FLSFQGYIDW QFAMDEKASG TNIDGKYNLT DNGGAFFLGL
YWHSDRFALG YGAKYYNNVY GLNDRAFAGA PWAEPDWTGL NTTGWGHYLT ATYKF
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