| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1023 |
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| Symbol | |
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| ID | 4017068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1170024 |
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| End bp | 1171286 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955015 |
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| Product | nucleoside transporter |
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| Protein accession | YP_562034 |
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| Protein GI | 91792383 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000239256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAATAG TAATGAGTTT AGTAGGGGTG GTAACCCTGC TTGCGATAGG TTTCCTCCTA
TCAACTAACA AAAAAGCGAT CAATGTTCGC ACTGTGGGTG GCGCATTAGC TATTCAAGCG
GCATTCGGTG GTTTTGTTTT ATACGTGCCA GTGGGCAAAG ATATTCTGAA GGGTGCTTCA
GATGCTGTAT CTAGCGTTAT TGGTTATGCA CAGAATGGTA TTAGTTTCTT ATTCGGCGAT
TTAGCTAACT TTAAAGTTGG TTTCATCTTC GCAATTAACG TATTGCCAAT TATCATTTTC
TTCTCTTCTT TAATTGCCGT GCTTTACTAC CTAGGCATCA TGCAGTGGAT CATCCGTATT
ATCGGTGGTG GCCTGCAAAA AGCACTAGGT ACAAGCCGTA CTGAGTCAAT GTCAGCAACT
GCTAACATCT TCGTTGGTCA AACTGAAGCG CCATTAGTTG TGCGTCCGTT TATCCCAACT
ATGACTCAAT CTGAATTATT CGCCATCATG GTGGGTGGTT TAGCGTCTAT TGCAGGTTCT
GTTCTTGCAG GTTACGCGCA GATGGGTGTA CCTATCGAAT ACTTAGTTGC CGCATCATTC
ATGGCAGCAC CAGGTGGTCT ATTAATGGCT AAACTGATGC ACCCTGAAAC TGAAACTGCT
AAGAACGATA TGGATGAATT ACCAGAAGAT CCAGACAAGC CAGCTAACGT ATTAGACGCA
GCTGCTGCTG GTGCTTCTTC AGGTATGAAC CTAGCGCTTA ACGTTGGCGC TATGCTAATC
GCATTCGTAG GCTTAATCGC TATGATCAAC GGCATCATAG GTGGTGTTAC TGGTTGGTTC
GGTCTAGAAG GTATCACCCT AGAGCTTATC CTAGGTTACA TCTTCATGCC TTTAGCATTC
CTAATCGGTG TGCCTTGGAG CGAAGCCTTA GTCGCTGGTT CTTTCATTGG TCAAAAGATC
GTAGTAAACG AATTCGTAGC CTACCTTAAC TTTGCTCCTT ACTTACTTGA TGCGTCTGCA
GAAGGTTTCA AAGTAGTTGC TGAGACAGGT GTCATGATGA CTGATAGAAC TAAAGCTATC
ATTTCGTTTG CACTGTGTGG ATTCGCTAAC CTTTCTTCTA TTGCGATTCT ACTTGGTGGT
TTAGGTGCTA TGGCGCCAAA CCGTCGCCAT GATTTAGCTA ACTTAGGTAT CCGTGCGGTT
ATCGCTGGTT CTTTAGCTAA CTTAATGAGC GCAACACTTG CTGGTTTATT CTTAGCCATC
TAA
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| Protein sequence | MEIVMSLVGV VTLLAIGFLL STNKKAINVR TVGGALAIQA AFGGFVLYVP VGKDILKGAS
DAVSSVIGYA QNGISFLFGD LANFKVGFIF AINVLPIIIF FSSLIAVLYY LGIMQWIIRI
IGGGLQKALG TSRTESMSAT ANIFVGQTEA PLVVRPFIPT MTQSELFAIM VGGLASIAGS
VLAGYAQMGV PIEYLVAASF MAAPGGLLMA KLMHPETETA KNDMDELPED PDKPANVLDA
AAAGASSGMN LALNVGAMLI AFVGLIAMIN GIIGGVTGWF GLEGITLELI LGYIFMPLAF
LIGVPWSEAL VAGSFIGQKI VVNEFVAYLN FAPYLLDASA EGFKVVAETG VMMTDRTKAI
ISFALCGFAN LSSIAILLGG LGAMAPNRRH DLANLGIRAV IAGSLANLMS ATLAGLFLAI
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