| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1020 |
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| Symbol | |
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| ID | 4016588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1166287 |
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| End bp | 1167183 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955012 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_562031 |
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| Protein GI | 91792380 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000492811 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGCTT TTTTTCGTGT CAAATTAAGT GCACTTTTCA TCGTGACGTC AGTGTTCTTG
TCAGCTTGCG TATCCACAAC ACCCTCAAAC TCAATCGATG ATGCCGTTGA CGGCAAAGTC
ATGGTCGCGC CATTAGTGCC AGATTATAAA CTCGAAGTGA CCTTGGCTAA GCTCAATGAA
ATTCTTGGTA CCATGGAACT CACTCGAGAG CAAAGAGCGC GCTTTCATTA TGATCGCGGC
GTAATTTACG ACAGTGTTGG TTTGAGGTTA CTCGGTCGAA TCGATTTTCA TCAAGCATTA
AAATTACAAC CAGATTTAGC GGATGCGTAT AATTTTATAG GAATTTATTA CACTCAAGAA
GGCGAGTTTG AGAGTGCTTA TGAGGCGTTC GATGGAGTAT TAGAGTTAGC GCCAGATTAT
GATTATGCTT TTTTAAACCG GGGTATCGCC TTGTATTATG GCGAGCGTAA TCAGCTGGCA
GTCGAAGACA TGCAGGCATT TTATGACAGA GACCCCAGCG ACGGTTACCG CGCGTTATGG
CTCTATTTAA TCGCAGAATC GGTAGAGAAA GAGCAAGCTG CTGTTCAGTT GCAAGGTAAC
AGACAGCAAC TCAATGATTC GGCCTGGTCT AGCGTATTGG TGGATTATTA TTTAGGTAAG
CTCACCAAGG AGCAGGTATT TCAAGCTGCT AAGGTCGACT TAACTAAACC CAGAGAATAC
GCTGAACGTC TCTGTGAAGC TTATTTCTAT CTGGCAAAAC GCGCCGCGAT GAATCAAGAG
TATCAACAGG CGGCTAATTA TTACCGCTTG ACCTTAGCGA CCAATATCTA TGATTTTGTT
GAACACAGAT ATGCGCGCAT CGAGCTGGCT AAAATGAGGC AACATTTAGG CGAGTAA
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| Protein sequence | MEAFFRVKLS ALFIVTSVFL SACVSTTPSN SIDDAVDGKV MVAPLVPDYK LEVTLAKLNE
ILGTMELTRE QRARFHYDRG VIYDSVGLRL LGRIDFHQAL KLQPDLADAY NFIGIYYTQE
GEFESAYEAF DGVLELAPDY DYAFLNRGIA LYYGERNQLA VEDMQAFYDR DPSDGYRALW
LYLIAESVEK EQAAVQLQGN RQQLNDSAWS SVLVDYYLGK LTKEQVFQAA KVDLTKPREY
AERLCEAYFY LAKRAAMNQE YQQAANYYRL TLATNIYDFV EHRYARIELA KMRQHLGE
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