Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0999 |
Symbol | rrmJ |
ID | 4017596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1137852 |
End bp | 1138481 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637954989 |
Product | 23S rRNA methyltransferase J |
Protein accession | YP_562010 |
Protein GI | 91792359 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000545676 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCTA AAAAACGAAC GGCCAGCTCA GCCCGCTGGA TGCAAGAACA TTTTGATGAT CACTATGTCA AACTCGCACA AAAAAGGGGG CTAAGGTCAC GTGCTGCATT TAAGTTAGAA GAAATTCAGC AAAAAGATCA TCTTATCCGC CAAGGCATGA CAGTGGTGGA CTTAGGTGCC GCGCCTGGCG GTTGGTCTCA GGTGGCGGTT AAGTTAGCCG GCGACAACGG TAAGGTCATT GCCTGTGACA TTTTGCCTAT GGATCCCATC GTGGGCGTCG ACTTCTTGCA AGGCGACTTT CGCGAAGAAA ATGTCCTCAA TGCGCTGCTT GACAGGGTAG GTGAGGACAA GGTTGATGTG GTACTATCTG ACATGGCTCC GAATATGAGC GGTTCAGATG GCGTCGATCA ACCTAGAGCT ATGTACTTGG TTGAATTAGC ATTAGAAATG TGTCATCAAG TATTGGCGCC TAATGGCTGT TTTGCAGTTA AGGTCTTTCA GGGGGAAGGC TTTGATGAGT ACATAAAATC AGTCAAACAA GCATTTAAAA CCGTAAAAAC ACGCAAACCA GACTCCTCTC GCGCCCGTTC TCGGGAAGTC TATCTAGTAG CGACTGGATA CAAGTTGTAG
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Protein sequence | MSAKKRTASS ARWMQEHFDD HYVKLAQKRG LRSRAAFKLE EIQQKDHLIR QGMTVVDLGA APGGWSQVAV KLAGDNGKVI ACDILPMDPI VGVDFLQGDF REENVLNALL DRVGEDKVDV VLSDMAPNMS GSDGVDQPRA MYLVELALEM CHQVLAPNGC FAVKVFQGEG FDEYIKSVKQ AFKTVKTRKP DSSRARSREV YLVATGYKL
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