| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0940 |
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| Symbol | rihA |
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| ID | 4016885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1073470 |
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| End bp | 1074405 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637954930 |
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| Product | ribonucleoside hydrolase 1 |
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| Protein accession | YP_561951 |
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| Protein GI | 162210778 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.019412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGTT CTATTATCCT TGATTGCGAT CCTGGCCATG ATGATGCCAT TTCGCTTATC
TTGGCCCTAA GCACTACAGC CCTCACTCCC TTGGCTGTGA CCACAAGTGC GGGCAATCAA
ACCCCAGATA AAACCTTATA CAATGCGCTG CGCATTTTAA CCTTGTTAGC GCGAAGCGAC
ATCCCAGTGG CAGGTGGTGC GCTTAAGCCG CTGGCACGCG AGCTTATCAT CGCCGACAAT
GTCCACGGTG AAACCGGGCT AGATGGTCCA ACTCTGCCTG AACCTGGCTT CGCGGCCCAG
CCCATTACAG CGGTTGAGTT GATGGCAGAA AAGCTGCGCC TAAGCCCAGT CCCTGTGACC
TTAGTGCCCT CAGGGCCTCT CACCAATATT GCGCTGTTAT TGGCCGCTCA CCCCGAGCTT
CACCCTAAGA TTGAACGTAT AGTGTTAATG GGCGGGGCAG CCGGAGTTGG CAATTGGACG
CCGGCCGCTG AATTTAACAT CTTCGTTGAC CCAGAAGCTG CCGACATAGT GTTTAAGTCT
GGCCTTCCCA TTACTCTTTG TGGTCTCGAT GTGACCCATA AGGCGCAAGT CATGGCTGAG
GACATTGAGC GTATTCGCAA CATTGGCAAT CCTATTGCGC TGTGCGTTGC CGAGTTATTG
GACTTCTTCC TTATTTATCA TAAAGATCCA AAATGGGACT TCACAGGTGC GCCTCTGCAC
GACCCTTGCA CCATAGCTTG GCTGCTTAAG CCGGAACTGT TCACCAGCCA AGATTGCTGG
GTCGGCATAG AAACTAAGGG CGAATATACC CAAGGCATGA CTGTCATCGA CAAGTATCAG
TTCACTGGCA AGCCTGCCAA TGCCACTGTC TTATTTGATA TCGACAGACA AGGCTTTGTG
GACTTTATCG TCGAGCGGTT ACACGCCTAT GACTAA
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| Protein sequence | MSRSIILDCD PGHDDAISLI LALSTTALTP LAVTTSAGNQ TPDKTLYNAL RILTLLARSD
IPVAGGALKP LARELIIADN VHGETGLDGP TLPEPGFAAQ PITAVELMAE KLRLSPVPVT
LVPSGPLTNI ALLLAAHPEL HPKIERIVLM GGAAGVGNWT PAAEFNIFVD PEAADIVFKS
GLPITLCGLD VTHKAQVMAE DIERIRNIGN PIALCVAELL DFFLIYHKDP KWDFTGAPLH
DPCTIAWLLK PELFTSQDCW VGIETKGEYT QGMTVIDKYQ FTGKPANATV LFDIDRQGFV
DFIVERLHAY D
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