| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0939 |
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| Symbol | |
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| ID | 4016884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1072492 |
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| End bp | 1073400 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954929 |
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| Product | ribokinase |
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| Protein accession | YP_561950 |
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| Protein GI | 91792299 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000942042 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGAC TCGTTATTTT AGGCAGTGCC AATGTGGATC ATGTGATGAG TTTTGAATAC
CTGCCCACCA CAGGCCAAAC CTTAATGAGC CAAAATTATC GTATCGAGCA CGGCGGCAAA
GGCGCTAACC AAGCGGTGGC TGTCGCTAGG CTGTGTTCCC CTAGTACCCG AGTGGATTTT
ATCTGCCATT TAGGCAATGA CACTCTGGCC CATGATATGT GTCATAGCTG GAAACTCGAT
GGTATTCACA GCGATGGCGT GAGTAAAATT GATAATCTAA GTACCGGCAG CGCATTGATT
TTCATAGATA AAAATGGTGA AAACTCCATA GGGGTCGCCC CTGGCGCTAA CGATAATTTA
TCTGTCAAAG CGCTTATGGA ACATCAAGAA CTCCTTAGCC GTGCCGACTG GTTATTAACC
CAACTGGAAA GCCCAACGCC TACGGTTATC GAAGCCCTAA AGCTTGTTAA ACAGCAAGGG
GGCAAGACCA TACTCAACCC GGCGCCGGCA AAAAATATCG GTACTGAGAT ATATAAATGG
GTGGATATCA TTACCCCCAA TGAAACCGAG GCCGAAGCCA TCACAGGCAT AGAAGTCCAT
GATGAAGACA GCGCCGCCTT TGCAGCACAA ATTCTTCATA GCCATGGCCC TAGCATAGTG
ATCATTACCT TAGGTGCACG CGGTGCCTAT GTGAGTAGCG CTGAATTTAG CGGCCTAGTT
GCCGCGCCGA ATGTGATGGC CATAGACACA GTCGCCGCTG GTGATACCTT TAATGGCGCC
CTTTTGGTCG GTTTAAGTCA GGAGCATGCA TTATTTGATG CCGTGACCTT TGCCAACAAG
GCCGCAGCGA TCACTGTGAC TCGCCAAGGG GCGCAGCGCA GCATTCCTTA TCGAGACTGC
CTTGTTTGA
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| Protein sequence | MSRLVILGSA NVDHVMSFEY LPTTGQTLMS QNYRIEHGGK GANQAVAVAR LCSPSTRVDF
ICHLGNDTLA HDMCHSWKLD GIHSDGVSKI DNLSTGSALI FIDKNGENSI GVAPGANDNL
SVKALMEHQE LLSRADWLLT QLESPTPTVI EALKLVKQQG GKTILNPAPA KNIGTEIYKW
VDIITPNETE AEAITGIEVH DEDSAAFAAQ ILHSHGPSIV IITLGARGAY VSSAEFSGLV
AAPNVMAIDT VAAGDTFNGA LLVGLSQEHA LFDAVTFANK AAAITVTRQG AQRSIPYRDC
LV
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