Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0870 |
Symbol | |
ID | 4017065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 993068 |
End bp | 994612 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637954860 |
Product | hypothetical protein |
Protein accession | YP_561881 |
Protein GI | 91792230 |
COG category | [S] Function unknown |
COG ID | [COG3673] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0826211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAATT TAGTGATTTG CTGTGATGGA ACGTGGAACA ATCCACAGCA AGAAGATAAC GGAGTACCGT CCCCAACCAA TGTGTATAAG CTCGCCAATG CCATCGCTCC TTTGGACAAT AACGGTGATA AGCAGATGGT TTATTATCAC CCAGGCCTTG GTGGTGAAGA TTCTGGCCTT AAAGATGCCA TAGTTGATGG AGCACTTGGC GTCAGTATCA AGCGTCATAT TTCCAGTGCT TATTATTGGT TGGCTACCCA TTACAAGCCT GGTGATAGTG TCTCAGTTTT TGGTTTTAGC CGCGGCGCGT TCACGGCGCG CAGTCTTTGT GGGTTATTAA AACAGGGCTT GTTGGACTTC AAAGGTTTAT CAGAGAAAGA GTCATGGCAG CGCACTCATG ATTTATATGA TTTCTATAAA AGGGTGGGCG CCGCACTCAC ACCTAGCTTC TTTATGGATA ATGCTGCCCC CTTCAAGGTG CATTTTCTGG GGGTGTGGGA CACAGTTGGC GCCTTAGGGA TCCCTAACGA TTTAGAATTT TTAAATTTGT TTGATGACCC TGAACGCTGG CGTTTTCATG ACACTGTGCT TGGGGATAAT GTTAGCATCG CGCGCCATGC CATGGCTTTG GATGAAAAAC GCAGCAGTTT TACTGTGACT CGCTGGAGTA ATGCGGACAG CCATAACAAT GCCAAAGAAA TGTGGTTTTC TGGGGTGCAC AGTGATGTCG GCGGCGGTTA TGCGGATTGC GGTTTGGCAG ACATATCCCT TAACTGGATG ATCGAAGAAG CGACTAAGGT CAGTGAACAA GGCAATAAGC TAACGTTTAG GCCGGGCATT TCTGCACTGA TGAAACCGGA TCCTAACGCT GTGTTACATA ATTCTTATAA AGGTGTTTTT AGTAAATTAC GTTCAAGACC TCGCAATATA GGTGCCGTGC TTCCAGCGAA TGAAGCCTAT TTTCATTCCA GTGTCTTTGC CCGTCAAGCC TCATCTCCAT TAGCCTATCC TGCCTATTGG CCAACTCAGT CACTGGCGGT GGGAGAGTCT TTGGCTGTGG ATGTGTTTGC TAAAAAACAC TGGAACCCGG CTAATTTGTA TATGGAAAAA GGTCAAAAAT ATTGCTTTAG TGCAACGGGT CAATGGCAAG ACAGTAAAGA TACCTGCGAT TGGAAAGGCA CTGAACACGG TAACCTCACT GGCGGGGATA TCGTTCGCGC TGCCTCATCC TTATGGGGGA TTACCGAGCG GGCATTTATG AAAATCACCA AAAACAAATT CACGGATTTC TGGGGCACCA AGCGAGTCGA ATCCTTAGAG TGGTTTGTTG CCGTAGGTTG TATCGCCAAT GATGATGGTG TACTCAATGC GGTTAATAAC GACGGCAGTC CAGAACCCCA TAAGTATTTT GCTTTGCCTG ACCATGAGCA GCATGGCTTA GAGGTGAAAA ATAGCGGCTA TTTTTATGCT TTCGCTAACG ATGTCTGGTC TTTGTATAAC AACAATCATG GCAGCATTAC GCTTACTATC ACGCGCATCG AATAA
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Protein sequence | MANLVICCDG TWNNPQQEDN GVPSPTNVYK LANAIAPLDN NGDKQMVYYH PGLGGEDSGL KDAIVDGALG VSIKRHISSA YYWLATHYKP GDSVSVFGFS RGAFTARSLC GLLKQGLLDF KGLSEKESWQ RTHDLYDFYK RVGAALTPSF FMDNAAPFKV HFLGVWDTVG ALGIPNDLEF LNLFDDPERW RFHDTVLGDN VSIARHAMAL DEKRSSFTVT RWSNADSHNN AKEMWFSGVH SDVGGGYADC GLADISLNWM IEEATKVSEQ GNKLTFRPGI SALMKPDPNA VLHNSYKGVF SKLRSRPRNI GAVLPANEAY FHSSVFARQA SSPLAYPAYW PTQSLAVGES LAVDVFAKKH WNPANLYMEK GQKYCFSATG QWQDSKDTCD WKGTEHGNLT GGDIVRAASS LWGITERAFM KITKNKFTDF WGTKRVESLE WFVAVGCIAN DDGVLNAVNN DGSPEPHKYF ALPDHEQHGL EVKNSGYFYA FANDVWSLYN NNHGSITLTI TRIE
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