Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0867 |
Symbol | |
ID | 4017062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 990760 |
End bp | 991725 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954857 |
Product | lipoyl synthase |
Protein accession | YP_561878 |
Protein GI | 91792227 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.719819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGGC CTGAAAGATT ACAACCTGGT GTCAAGCTGC GCGATGCAGA CAAAGTGGCA CGTATTCCGG TGAAAATTGT TCCTTCTGAG CGCGAAACCA TGTTGCGAAA GCCCGATTGG TTAAGGGTAA AGTTACCGGC ATCGAATCAA CGCATCTTAG AAATTAAGGC CGCATTACGT AAAAATGGCC TGCACTCTGT ATGTGAAGAG GCCTCGTGCC CGAATTTATC TGAGTGCTTC AATCACGGCA CTGCGACCTT TATGATCTTA GGCGCCATCT GTACTCGCCG TTGCCCATTT TGTGACGTTG CCCACGGTCG TCCACTTAAG CCTGATGCCG AAGAGCCAGT CAAATTGGCG CAAACTATCC GCGACATGAA GCTTAAGTAT GTGGTGATCA CTTCAGTTGA CCGTGATGAC TTACGCGATG GCGGTGCCCA ACATTTTGCC GATTGTATTC GTGAAATTCG CAAGCTCAAT CCAGACATTA AAATTGAAAC GCTAGTACCC GATTTCCGTG GCCGTATCGA TGCCGCACTT GATATTCTGT CTGCCGAGCC GCCGGATGTA TTCAACCACA ACCTAGAAAC GGCGCCAGCT CATTATCGCA AGGCAAGGCC TGGGGCTAAC TATCAGTGGT CATTGGATTT ACTTAAACGC TTTAAGGAGC GTCACCCACA TATTCCTACT AAGTCGGGCT TGATGATGGG CCTAGGTGAA ACCAATGAAG AAATCGCCGA GGTATTACGT GACTTAAGAA GCCACAATGT GGAAATGTTG ACTTTAGGCC AGTACTTACA GCCATCGAAG TTCCATTTAC CTGTGGTGCG CTACGTACCG CCCGCAGAGT TTGACGAGTT AAAAGTCTTG GCCGATGAGC TAGGTTTTAC CCACGCCGCC TGTGGCCCTA TGGTACGTTC GAGCTACCAT GCCGACTTAC AAGCTCAAGG GAAAGAAGTG AAATAG
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Protein sequence | MNRPERLQPG VKLRDADKVA RIPVKIVPSE RETMLRKPDW LRVKLPASNQ RILEIKAALR KNGLHSVCEE ASCPNLSECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDAEEPVKLA QTIRDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRKLN PDIKIETLVP DFRGRIDAAL DILSAEPPDV FNHNLETAPA HYRKARPGAN YQWSLDLLKR FKERHPHIPT KSGLMMGLGE TNEEIAEVLR DLRSHNVEML TLGQYLQPSK FHLPVVRYVP PAEFDELKVL ADELGFTHAA CGPMVRSSYH ADLQAQGKEV K
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