| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0860 |
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| Symbol | |
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| ID | 4017055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 983719 |
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| End bp | 985560 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954850 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_561871 |
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| Protein GI | 91792220 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGT CGTTAGAGAA GTCATTAACC CTGTGGCTTA AGCAGCAACA GGCTGCCTGC
TCTGGGTACC TTAAACTCAC AGTCTTATTT GGCGTTTTCA CCGGCCTTTG TCTGCTTGCA
CAAGCCTATC TACTGGCCAA GGTGCTAGAT GGCCTTATCA TGCAAAACAT GCAAATAACC
CGCTTTTACC CTGAAATTGC AAGCTTACTG CTACTGACGT CATTTCGGGC CTTACTCGCC
TATGCAAGGG AGCGTTCTGG TTTCATAGCG GGTCAACGCC TTAGGGCTCA AGTGCGCCAA
ACTGTGCTCA ATAAACTTGT CGCCTTAGGC CCAAGCTTTA TCAAGACAAA ACCCGCTGGT
ACCTGGGCGA ATATCGTGTT TGAACAAATC GAAGATCTGC AGGATTTTTA TGCTAAATAC
CTGCCTGCCA TCTTATTAGC CGGGTTTACT CCGTTAATTA TTCTTGCAGC CATAGTGCCG
GTCAACTGGC TAAGTGCCAT CATCTTATTG GTCACAGCCC CCTTAATCCC GCTTTTTATG
GTGCTGGTCG GCATGGGCGC CGCCGAAGCT AATCGTAAAA ATTTCTCAGC GCTGCAACAA
TTAAACGGCC ATTTCCTCGA CAGCTTAAGA GGCCTTAGAA CCTTAATTCT GTTTCATCGC
CAGCAAGATG AAATAGCCAA TATTGCCAGT GTCTCTAATG ACGTTAAGCA ACGCACCCTA
TCTGTGCTTA GCCTTGCCTT CTTGAGCTCA GCCGTACTTG AATTTTTCGC TGCCATCTCC
ATCGCCATCT TGGCGGTGTA TTTTGGTTTT AGCTACTTGG GCCATTTAGA TTGGGGAAAT
TTTAGCCTGC TTCCATCGAG TGAGCAGCAG TTAAGTTTAT TTAGCGGCTT ATTCGTATTA
CTGCTGGCTC CTGAGTTTTA TCAGCCACTT AAAGATCTTG GCAGCCATTA CCATGCCAAG
GCCAAAGCGA TTGCCGCAGC AGAAAGCCTG GTCGCCTTGC TTAGTATTCA AGAAACTGCC
CTTCCTCTTA AGGGTGTCCC AGTGCAACAA GATTCGAGTA CATCACTTGC CAAGATTGAG
TTCACCACTT GGGAGCTTGA GGCTAATAAC CTAACGGTGT TAAGCCACGA AGGTCAATGC
CTATTAGGGC CACTTGACTT CAGCATTAGC GGCCTTAAAA AACTGGCTGT CGTCGGGGCT
AGCGGCTCAG GTAAAACCAC CTTAGTAAAC TTACTATTGG GCTTTTTACC CTATGAAGGA
TCACTCAAAA TCCAAGGTAT TGAATTTAAC CAGCTAGATT TAACCGATTG GCGGCAAAAG
CTTGCCTGGC TTGGGCAGGA GCCACAATTG TTTCACGGCA CCTTAATGGA AAACTTAAGC
CTTGGGGACA AAGCGCTAAC CCCAGAGAAA GCTTGGGAAT TACTAAGAAA AGCCAATATT
GATCAATTTG TCGCAGCCCA CCCACAAGGA CTTGATTTAA CCATAGGCGA ACAAGCCATT
GGTATTTCAG TGGGCCAAGC CCAGCGGTTC GCTCTGGCTA GAGCCTTAAA CCATGATGCA
CAGGTATTTA TGTTAGATGA ACCCACTGCC AGCTTAGATA TCTCCAGCGC GGAGGCGATA
TCCCAAAGCA TTGCCAAAGA AACTGCGTCA AAGTGTTTGT TACTGGTGAC TCACAAACTC
AGTCAATTAC AAAATATGGA TACCATACTC GTGCTTGAGA AAGGCCGCTT AGCCAGTCGC
GGGACATATG ATGAGTTGAT GGCCGAACAG GGATTATTTT ATCAGCTCAA TTTAGAGGCC
AGCTATGACA TCAACTTACA GACAAGCATA GGGCTAAGTT AA
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| Protein sequence | MDKSLEKSLT LWLKQQQAAC SGYLKLTVLF GVFTGLCLLA QAYLLAKVLD GLIMQNMQIT
RFYPEIASLL LLTSFRALLA YARERSGFIA GQRLRAQVRQ TVLNKLVALG PSFIKTKPAG
TWANIVFEQI EDLQDFYAKY LPAILLAGFT PLIILAAIVP VNWLSAIILL VTAPLIPLFM
VLVGMGAAEA NRKNFSALQQ LNGHFLDSLR GLRTLILFHR QQDEIANIAS VSNDVKQRTL
SVLSLAFLSS AVLEFFAAIS IAILAVYFGF SYLGHLDWGN FSLLPSSEQQ LSLFSGLFVL
LLAPEFYQPL KDLGSHYHAK AKAIAAAESL VALLSIQETA LPLKGVPVQQ DSSTSLAKIE
FTTWELEANN LTVLSHEGQC LLGPLDFSIS GLKKLAVVGA SGSGKTTLVN LLLGFLPYEG
SLKIQGIEFN QLDLTDWRQK LAWLGQEPQL FHGTLMENLS LGDKALTPEK AWELLRKANI
DQFVAAHPQG LDLTIGEQAI GISVGQAQRF ALARALNHDA QVFMLDEPTA SLDISSAEAI
SQSIAKETAS KCLLLVTHKL SQLQNMDTIL VLEKGRLASR GTYDELMAEQ GLFYQLNLEA
SYDINLQTSI GLS
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