| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0853 |
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| Symbol | |
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| ID | 4017048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 976273 |
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| End bp | 977283 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954843 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_561864 |
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| Protein GI | 91792213 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000114292 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCAA ACAATAGACT AGTTGCAGCC TTGATATGCG TATTGGGGTT ATCAAGTTCC
TTAGTGCATG CCCTGCAACC GGCAGACACC AAAGAAATAA CCGAATTGAA AAAAGCCTTT
ATTAAGGAGC AAGTAAGTAA AGGCGTTAGC CAGCAGCAAG CACAAGCTTA TCTTGATGGC
GCTAACTATA ACCAAGCCGT GATCGATGCC ATCACTAAAC CTTGGGAAGC CAAACCTTGG
CACCAATATT TTCCTATTTT TCTTACTGAA AAACGGCTTC AAGCTGGGTT AGCATTTTGG
AAAACACATC AGAAAACCAT TCAACGCGCG GCCGATAAGT TTAATGTCGA CCCTCAGATC
ATCGTCGCTA TCATAGGCAT TGAAACCTTT TACGGCGGCT ACATGGGCAA CTATGCGCCT
CAAGATGCGC TTTATACCTT AGGTTTTTAT TACCCACCAA GAGCCACATT TTTCAGAAGC
GAATTTGGTC ACTTGATGTC GCTAATTAAA GAAGAAAAAC TCGATGCCGC CAATCTCAAA
GCCTCATATG CGGGTGCCAT GGGCTTTGGT CAGTTTATTC CTTCAAGCTA TCGTCACTAT
GCGGTGGATT TCGATGGTGA TGGCAGACGC GACTTACTCA CAAGCCCCGC CGATGCCATT
GGCAGTGTCG CTAATTACTT TCATCAACAT GGCTGGCAAC GTAATGCCGA TGTCGCCTTG
CCACTGACCA ACACTATGGC AAGCCCACCT ATGGCTAAAG TCTGGAGCGG CGAAAAGCTT
AACTATAAGG TGTCGGATAT TCTTAGCCCT AATTTAAGCC TGGCCCAGGC AAAAGATATC
GATGCAAGTC AAAGTGCCCT GCTGATATCC CTTGAGCAGG CAGACAAGAC TGAGTATTGG
TTGGGTTTGA AAAACTTTTA TGTGATTACT CGCTATAATC GCAGTCCCTT GTATGCCATG
GCCGTTTACC AATTTAGTCA ACAACTCAAA GCCCATCACA ATGCAAACTA A
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| Protein sequence | MRSNNRLVAA LICVLGLSSS LVHALQPADT KEITELKKAF IKEQVSKGVS QQQAQAYLDG
ANYNQAVIDA ITKPWEAKPW HQYFPIFLTE KRLQAGLAFW KTHQKTIQRA ADKFNVDPQI
IVAIIGIETF YGGYMGNYAP QDALYTLGFY YPPRATFFRS EFGHLMSLIK EEKLDAANLK
ASYAGAMGFG QFIPSSYRHY AVDFDGDGRR DLLTSPADAI GSVANYFHQH GWQRNADVAL
PLTNTMASPP MAKVWSGEKL NYKVSDILSP NLSLAQAKDI DASQSALLIS LEQADKTEYW
LGLKNFYVIT RYNRSPLYAM AVYQFSQQLK AHHNAN
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