| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0844 |
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| Symbol | |
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| ID | 4016808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 967262 |
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| End bp | 968443 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954834 |
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| Product | major facilitator transporter |
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| Protein accession | YP_561855 |
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| Protein GI | 91792204 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTTG AATTTAATCG CTTGGGATTT TCTATGAAGA ATGAGTCTAT CATTTTTATT
GCCTGTATCA CGGTATTCTT GGCACAGCTG GGAATGACTA TGTATCTACC GGCTCTGCCT
ATTATTGCAG AAGCATTCTC TAGCCCAGCA CAAGATGTCT CTCTTTCCTT ACCCGCTTTT
TTGATAGGAA TGGCGGCACC TATGCTGGTC TGGGGAAGCT TAAGTGAAAA ATATGGTCGG
AAAACGATGC TTTCGGTATC TCTTTTATCA TATGCAATCT GTAGCGCTGG CATATCTTTA
GTATATGACA CAGAAATGTT TATTTTACTT CGTTTCCTAC AAGGCTTGGG GGCTAGTGGT
ATGTCAGTTA TGTCACGGAT TATGATCCGT GACCGATTCA GCGGTGCACT ACTGTCTAAG
AGTCTGTCTT GGCTGTCTAT TGCATTTGTT GTTTCACTTG GCGTGGGCCA ATATTTGGGA
GCAGTACTTT TGGTGAGCTT GGGCTGGCAA GCTATTTTTC TCAGCCTTGC AATTGCTACA
TTATTGTTAT TTTTAGTCCT TATAAGGCTA CCATCTCCAA ATGTACAGCC TTCCAGTAAC
TCATTATCAT TTCTTGCCAC TTACGCTAAG CTATTGCACA GCAGAGACTT TTTTTTACCT
GCACTTGCAG GTGGCCTAGG TTACGGGGTG ATCATCGTCT TCAATACCAA TGCGCCATTT
ATATTTCAGG GGGCCTTCGG TTGGAGTGCA TCAGAGTACG GGCTGTTGGG GTGGCCAATA
AGCCTTGCCT ACTTAGTTGG TGCATGGCTG GTTAATCGGT ATGTGATAAG AAAAGGCAAC
ACTTTTTTTG TCTTAATGGG GTTAAGCATC TTGCTCTTCA GTTGTACGGT TATGTTATTT
GGCAGTATCT TGCTATTGCC TTTGTTGCTA TGGGTTCCTT ATTGTCTGGG AGTCGCTGGA
CAAGCGATGA ACTATCCCGT CAGTATGGCT ATTGCTACTG AAAATGCGCC CATAAAGGGC
CCTTATGCTA TGGCTTTGTG TGGATTCATG CATCAACTTA TGGCCGCCGT TATCGGTGTT
GTAGCGAGTA TATTACCCGG GGAATACATT TGGATGAGCA CGGGGTTGAT GTGCGCGCTG
GCAATGGCCG CACTTGTGGT TATTATGCGA ACCCGTCCAT AA
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| Protein sequence | MRLEFNRLGF SMKNESIIFI ACITVFLAQL GMTMYLPALP IIAEAFSSPA QDVSLSLPAF
LIGMAAPMLV WGSLSEKYGR KTMLSVSLLS YAICSAGISL VYDTEMFILL RFLQGLGASG
MSVMSRIMIR DRFSGALLSK SLSWLSIAFV VSLGVGQYLG AVLLVSLGWQ AIFLSLAIAT
LLLFLVLIRL PSPNVQPSSN SLSFLATYAK LLHSRDFFLP ALAGGLGYGV IIVFNTNAPF
IFQGAFGWSA SEYGLLGWPI SLAYLVGAWL VNRYVIRKGN TFFVLMGLSI LLFSCTVMLF
GSILLLPLLL WVPYCLGVAG QAMNYPVSMA IATENAPIKG PYAMALCGFM HQLMAAVIGV
VASILPGEYI WMSTGLMCAL AMAALVVIMR TRP
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