| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0834 |
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| Symbol | |
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| ID | 4016798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 955752 |
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| End bp | 956141 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637954825 |
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| Product | glycine cleavage system protein H |
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| Protein accession | YP_561846 |
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| Protein GI | 91792195 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
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| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.136673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACTA TCCCGACAGA TTTAAAATTT GCCTCTTCAC ACGAATGGGT TCGCAAGGAA
GACGACGGTA GCTATACAGT GGGCATCACA GAACATGCTC AAGAGCTGTT AGGCGACATG
GTATTCGTGG AATTACCAGA AGTGGGTGAT TCAGTCAGCG CGGGTGCAGA ATGCGCCGTT
GCTGAGTCGG TAAAAGCCGC ATCAGACATC TACGCGCCGA TTTCAGGCGA AGTGGTTGCG
GTGAACAGCT CATTAGAAGA TTCACCAGAA TTAGTGAACA GCGACGCATA CGGTGACGGC
TGGTTCTTCC GCATCATGCC ATCTGACGAG TCAGAAGTGG ATGCATTGCT CGATGCTGAA
GGCTACCAAG ATGTGATTGA CGAAGCCTAG
|
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| Protein sequence | MSTIPTDLKF ASSHEWVRKE DDGSYTVGIT EHAQELLGDM VFVELPEVGD SVSAGAECAV
AESVKAASDI YAPISGEVVA VNSSLEDSPE LVNSDAYGDG WFFRIMPSDE SEVDALLDAE
GYQDVIDEA
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