Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0812 |
Symbol | |
ID | 4017035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 931304 |
End bp | 932182 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637954796 |
Product | CBS:transporter associated |
Protein accession | YP_561824 |
Protein GI | 91792173 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGATG ACAACCCCCC GAGTACAAAC GCCTACAAGA AAAACTGGTT CGAACGTGTT GGTCAGTTAT TTCAAGGCGA ACCTCAAAAC CGTGAAGATT TAGTCGACGT GATCGATGGC GCCGAAATGC GCGATCTCAT CACTGAAGAT ACCCGAGAAA TGATCAAAGG CGTGTTAGAA GTATCAGATC TTAGGGTTCG GGATATCATG ATCCCCCGCT CACAAATTGT GACTATACAA ATTAACAGCA GCGTCGAAGA ATTACTCGAC ACTGTCATCA ACTCTGCCCA TTCCCGCTTT CCCGTTGTCA ATGAAGACAA AGATCATATC GAAGGCATAC TACTTGCTAA AGATTTGATT AAATACGGCT TTAACCATGC CGGCGAAGAT TTCTCCATCG AGAAAGTGAT CCGCCCCGCC GTGGTTGTCC CCGAAAGCAA GCGTGTTGAT GTACTGCTAA AAGAATTCCG CTCTCAGCGT TACCACATGG CCATCGTTGT CGATGAATAC GGCGGCGTGT CGGGTCTTGT GACCATCGAA GATATTCTTG AAGAAATCGT CGGTGAGATC GAAGATGAAT TCGATCACAG CTCGGCCGAA GACACTGAAA TCAAGCGGAT AAGCAATACT GTCTTTATGG TCAAAGCCTT GACCCCCATC GATGATTTCA ATGATGCCTG CGGCACTCAA TTTAGCGATG AAGAATTCGA TACCGTCGGT GGATTAATTT CTCATGCCTT TGGCCATTTG CCAGAGCGTA ATGAAATCAT AGTCATAGAC AATATTGAAT TTAAAATCAC CAACGCTGAC AATCGCCGTT TGATCCAGCT TAGGGTCAAA CTGCCCGATC CCAATAATAC TGAAGAACTC GGCATTTAA
|
Protein sequence | MSDDNPPSTN AYKKNWFERV GQLFQGEPQN REDLVDVIDG AEMRDLITED TREMIKGVLE VSDLRVRDIM IPRSQIVTIQ INSSVEELLD TVINSAHSRF PVVNEDKDHI EGILLAKDLI KYGFNHAGED FSIEKVIRPA VVVPESKRVD VLLKEFRSQR YHMAIVVDEY GGVSGLVTIE DILEEIVGEI EDEFDHSSAE DTEIKRISNT VFMVKALTPI DDFNDACGTQ FSDEEFDTVG GLISHAFGHL PERNEIIVID NIEFKITNAD NRRLIQLRVK LPDPNNTEEL GI
|
| |