| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0800 |
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| Symbol | |
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| ID | 4016964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 919175 |
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| End bp | 919849 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954785 |
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| Product | response regulator receiver |
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| Protein accession | YP_561813 |
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| Protein GI | 91792162 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.271408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAT TGTTGATTGA AGATTCAGAA CCCCTGCGCC GTGGACTCAA GGTCGGCCTA
GATCACTTAG GTTACACCAT AGATGAAACC GGCGATGGTG CCCATGGCCT GAGCATGGCG
CTGACTAATC AGTATGATGT GATCATACTC GATTTGATGC TGCCCAGTGT CGATGGCATT
AGCATTCTTA AAAGCATTCG TCAGCTGGGC AATCAAGCTA AGGTGATTAT CCTCTCGGCC
AAATCACAAC CCGAAGACAG GGTGAATGGC CTACTGTCGG GTGCCGATGA TTACCTAGGT
AAACCCTTTT CATTCGACGA ATTACACGCA AGATTAGTGG CGCTCACTCG CCGTGGCCAA
CTCAACCAGA TAAACGCTAA TCTCACCGTG GCTGAGTTTG AGCTAGATTC GAATAAAAAA
TCTGTGTTCT ATCAAGGCCA AGCCATAGAG CTCACCAAGA ACGAATACAA AATTTTAGAG
TATTTGTTTA GCAATCAAGA ACAAGTATTA AACCCAGAGC AAATCAGTGA GGCCGTGGTT
GGCAGTTTCG ATAGCCTGTC AAAAAACACC ATAGAAGCGC ATTTATCCTC CATACGTAAG
AAGGCAAAAT TACTGGGCGG CACATTACCC GTGAAAAACA AACGTGGTTT CGGTTACTAT
GTCGGCGATT GCTAA
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| Protein sequence | MKVLLIEDSE PLRRGLKVGL DHLGYTIDET GDGAHGLSMA LTNQYDVIIL DLMLPSVDGI
SILKSIRQLG NQAKVIILSA KSQPEDRVNG LLSGADDYLG KPFSFDELHA RLVALTRRGQ
LNQINANLTV AEFELDSNKK SVFYQGQAIE LTKNEYKILE YLFSNQEQVL NPEQISEAVV
GSFDSLSKNT IEAHLSSIRK KAKLLGGTLP VKNKRGFGYY VGDC
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