| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0789 |
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| Symbol | |
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| ID | 4016739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 906603 |
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| End bp | 907412 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954774 |
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| Product | TonB-like protein |
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| Protein accession | YP_561802 |
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| Protein GI | 91792151 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000813282 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGATCT TAAGACTCTC TGAATTGCGA CCGATAGAGG ATAAATCTGT GACCCCTAAA
CGCTACATGC TGACTGCTGG CATCATTATT TCAGTGCAAA TGGGTTTGCT TGCTGGTGTT
TATGCCTATT CAGGCTCCCA AGCAAGCGAT GCACTGCCAA GTAGCGCCAA TCACAATAAC
CGTTCTGCAC CCACTAAAAA TAACGTCAGC CTAGCCTTAA GCTTTAGATC TCAAGCCACT
GAGCCTGAAA TCACAGCCAA TAACAGCATC AAGACTGCGC ACGATACCGT CACGACACCC
GCGCTGGTAA GCAAACCTAA ACCAATAAAC AAGCCTAAGC CTGTCGCTAA TTCAGAGCCA
ATAGCTAAAG TTAAGCCAGA AGTTAAGCCA GAGCCAAGCC AGACTGCCAG TAAAACTGAC
ACATCAACAG AGATGCTCGC TCAAACAGCG TCTAATAGCA GTGCCCAACC ACAGGCATTA
GAAGCCGTAG AGCAAGTATC TGCGCCGGTA AATCATGCGG CAATGCAAAG TCAATTAAGC
CTTGGAAAAC CAAAATTTTC TGCGCCGCCA ACTAAACCTA ACTACCCGCG CCTTGCACGC
AAACGCGGCT TGCAAGGCAC CGCATTGGTG GAGGTGTTAT TCGATAATCT AGGTAAGCAG
ATCGAGTTAA ACCTAGTCGA TAGCTCAGGT GCGGCCATCT TAGATAAAGC GGCATTAGAT
GCGGTAAAAC TGTGGCAATT TTCACCTCCT AGCCCTCAAA GCGCCCTCGC TTATCGGGTG
CAAGTGCCTG TGACTTTTAC GCTGAATTAA
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| Protein sequence | MWILRLSELR PIEDKSVTPK RYMLTAGIII SVQMGLLAGV YAYSGSQASD ALPSSANHNN
RSAPTKNNVS LALSFRSQAT EPEITANNSI KTAHDTVTTP ALVSKPKPIN KPKPVANSEP
IAKVKPEVKP EPSQTASKTD TSTEMLAQTA SNSSAQPQAL EAVEQVSAPV NHAAMQSQLS
LGKPKFSAPP TKPNYPRLAR KRGLQGTALV EVLFDNLGKQ IELNLVDSSG AAILDKAALD
AVKLWQFSPP SPQSALAYRV QVPVTFTLN
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