Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0771 |
Symbol | |
ID | 4016721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 890969 |
End bp | 892366 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954756 |
Product | major facilitator transporter |
Protein accession | YP_561784 |
Protein GI | 91792133 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00332718 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAT TTATTAGTGC CTCCATCGAT GCCCTGCGTG TTTATTATCA TAAACGTGTG CTTATCTTAC TGTTACTTGG CTTCTCCGCT GGCTTACCGC TCATGCTGGT CTTTTCAACC TTGAGCTTTT GGCTGCGAGA AGCAGGCGTC GATAGGGCTG CTATCGGCTA TTTCAGCTGG ATTGCCTTAG CCTATGCCTT CAAATGGGTC TGGTCCCCCT TAGTAGACAG AATGTCCTTG CCTTTGCTCA CCCGCTGGCT AGGCAGGCGC CGCGCTTGGA TGCTGTTGGC GCAAATATTA CTGGTACTGG CGATTTTGGG CATGTCGGTT AGCGATCCCT TAGAAGATTT AGACAAGCTC GTTCTGTTCG CCTTGATGCT GGCTTTCGCC TCGGCCACTC AAGATATTGT CATCGACGCG TTTAGAATCG AGTCTGCCCC AGAGAAAATG CAAGCCGCAC TCGCCGCCGC TTATCAAGTG GGCTATCGCA GTGCCATGAT AGTTGCCACC GCAGGTGCGC TCACCATAGC CGCTTGGGTG CAACCTGGCG ATGACAGCTA CAACCTTGAA GCCTGGCAGA CAGCCTACAC CATTATGGCG GCCTTAATGG GGGTTGGTAT ACTCACCACT CTTTTCAGCC GAGAACCTGT GGTGGATACC AAGGAAGCCG ATGCCACTGA AGATGCCATG AGGCAAAGCT TAAGCGAAAA TTACCCCAAA CCTGTCGCGG CGGCAATGTC ATGGGTTTAC ACTGCTAGCG TACTGCCATT TTTGGACTTT TTTAAACGCT ACGGCAAGAG CGCCATACTG ATTTTATTGC TGATTTCATG TTATCGCATT TCAGATATTG TCATGGGGAT CATGGCTAAT GTGTTTTATG TAGACATGGG ATTTAGCAAG GAAGAAATCG CCTTTATCAG TAAAGTTTAT GGGTTAATCA TGACCTTAGT GGGCGCGGCA TTTGGCGGGG TACTATTAGC TCGCTATGGC ACCATAAAAA TTCTTTTCCT AGGTGCCTTA CTGGTGGCGC TAACCAATTT ATTGTTCGCC TGGCAAGCTG TGGTCGGTTA TGACGTGACT TTGCTAACCT TAGTGATTTC CATCGATAAC TTCAGCGCAG GTATCGCCAC CGCGGCCTTT ATTGCTTACC TTTCAAGCCT GACAAGCTCG GGCTATAGCG CCACCCAGTA CGCACTGCTT TCATCGATTA TGTTGCTATT CCCTAAATTT ATTGCAGGAT TTTCAGGGGA ATATGTGGAT GCTTTTGGCT ATGTAAACTT CTTTATCGCC GCCAGTATCA TAGGCTTGCC CGTGTTAATC TTGATCGCCT TGTTGCAGCG AAAGAATGGC CAAATTGCCG CACTTGCAGC CAAGGAAGCA AAAGCTGACG TTGAGTAG
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Protein sequence | MTQFISASID ALRVYYHKRV LILLLLGFSA GLPLMLVFST LSFWLREAGV DRAAIGYFSW IALAYAFKWV WSPLVDRMSL PLLTRWLGRR RAWMLLAQIL LVLAILGMSV SDPLEDLDKL VLFALMLAFA SATQDIVIDA FRIESAPEKM QAALAAAYQV GYRSAMIVAT AGALTIAAWV QPGDDSYNLE AWQTAYTIMA ALMGVGILTT LFSREPVVDT KEADATEDAM RQSLSENYPK PVAAAMSWVY TASVLPFLDF FKRYGKSAIL ILLLISCYRI SDIVMGIMAN VFYVDMGFSK EEIAFISKVY GLIMTLVGAA FGGVLLARYG TIKILFLGAL LVALTNLLFA WQAVVGYDVT LLTLVISIDN FSAGIATAAF IAYLSSLTSS GYSATQYALL SSIMLLFPKF IAGFSGEYVD AFGYVNFFIA ASIIGLPVLI LIALLQRKNG QIAALAAKEA KADVE
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